Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC129492.6-201ENST00000611383 1305 ntBASIC14.29□□□□□ -0.12
LRRC28Q86X40 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRC28Q86X40 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRRC28Q86X40 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 GRK6P1-201ENST00000400595 1711 ntBASIC14.28□□□□□ -0.12
LRRC28Q86X40 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 IGLL3P-201ENST00000412472 434 ntBASIC14.28□□□□□ -0.12
LRRC28Q86X40 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 AC087163.2-201ENST00000457299 853 ntBASIC14.28□□□□□ -0.12
LRRC28Q86X40 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRC28Q86X40 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRC28Q86X40 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRC28Q86X40 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.27□□□□□ -0.12
LRRC28Q86X40 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 BX842568.4-201ENST00000421222 227 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 AC004832.2-201ENST00000426397 482 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 RHOQP3-201ENST00000437982 621 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 FAM185BP-201ENST00000443595 716 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 CXCL1P1-201ENST00000502804 216 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms