Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AC023141.5-201ENST00000458585 616 ntBASIC14.75□□□□□ -0.05
ZNF550Q7Z398 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AC011270.2-201ENST00000624293 2550 ntBASIC14.75□□□□□ -0.05
ZNF550Q7Z398 AL691432.1-201ENST00000596308 1422 ntBASIC14.75□□□□□ -0.05
ZNF550Q7Z398 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AC109322.1-201ENST00000524499 1264 ntBASIC14.74□□□□□ -0.05
ZNF550Q7Z398 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 LINC01225-203ENST00000563550 1244 ntBASIC14.74□□□□□ -0.05
ZNF550Q7Z398 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 UXT-AS1-201ENST00000590504 1525 ntBASIC14.74□□□□□ -0.05
ZNF550Q7Z398 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AC134407.2-201ENST00000625089 1978 ntBASIC14.74□□□□□ -0.05
ZNF550Q7Z398 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ZNF550Q7Z398 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.73□□□□□ -0.05
ZNF550Q7Z398 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 AC004987.2-201ENST00000395959 1148 ntBASIC14.73□□□□□ -0.05
ZNF550Q7Z398 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.73□□□□□ -0.05
ZNF550Q7Z398 AC005237.2-201ENST00000434368 219 ntBASIC14.73□□□□□ -0.05
ZNF550Q7Z398 AL592309.1-201ENST00000443127 649 ntBASIC14.73□□□□□ -0.05
ZNF550Q7Z398 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms