Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LRRK2Q5S007 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRK2Q5S007 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 AL157792.1-201ENST00000488281 530 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 MIR6842-201ENST00000612539 65 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 PCGF3-213ENST00000620529 1899 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 RN7SL713P-201ENST00000582127 302 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 HLA-A-202ENST00000376806 1854 ntBASIC13.6□□□□□ -0.23
LRRK2Q5S007 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LRRK2Q5S007 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRRK2Q5S007 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 BICD1-207ENST00000551848 1962 ntBASIC13.59□□□□□ -0.23
LRRK2Q5S007 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 AC242376.1-201ENST00000559033 726 ntBASIC13.59□□□□□ -0.23
LRRK2Q5S007 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 AC105137.3-201ENST00000617588 984 ntBASIC13.59□□□□□ -0.23
LRRK2Q5S007 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 AL391256.1-201ENST00000443260 1855 ntBASIC13.59□□□□□ -0.23
LRRK2Q5S007 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.59□□□□□ -0.23
LRRK2Q5S007 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 AC012362.1-201ENST00000434906 739 ntBASIC13.59□□□□□ -0.23
LRRK2Q5S007 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.59□□□□□ -0.23
LRRK2Q5S007 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRRK2Q5S007 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms