Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 AC009078.2-202ENST00000463353 338 ntBASIC17.92■□□□□ 0.46
HS1BP3Q53T59 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 U82695.1-201ENST00000635752 1889 ntBASIC17.92■□□□□ 0.46
HS1BP3Q53T59 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HS1BP3Q53T59 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 AL022342.1-201ENST00000400363 863 ntBASIC17.91■□□□□ 0.46
HS1BP3Q53T59 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 NUS1P2-201ENST00000417358 873 ntBASIC17.91■□□□□ 0.46
HS1BP3Q53T59 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 AC005336.2-201ENST00000593183 939 ntBASIC17.91■□□□□ 0.46
HS1BP3Q53T59 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HS1BP3Q53T59 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 AC068587.6-202ENST00000641839 5619 ntBASIC17.9■□□□□ 0.46
HS1BP3Q53T59 AC131009.4-201ENST00000624048 1740 ntBASIC17.9■□□□□ 0.46
HS1BP3Q53T59 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 NSUN5P1-202ENST00000421140 1535 ntBASIC17.9■□□□□ 0.46
HS1BP3Q53T59 NSUN5P2-203ENST00000457352 1529 ntBASIC17.9■□□□□ 0.46
HS1BP3Q53T59 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 AC079781.3-201ENST00000449110 356 ntBASIC17.9■□□□□ 0.46
HS1BP3Q53T59 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 AC091167.2-201ENST00000579581 588 ntBASIC17.9■□□□□ 0.46
HS1BP3Q53T59 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HS1BP3Q53T59 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms