Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RSPO1Q2MKA7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO1Q2MKA7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.77□□□□□ -0.2
RSPO1Q2MKA7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO1Q2MKA7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
RSPO1Q2MKA7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 MIR1233-2-201ENST00000408138 82 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 MIR1233-1-201ENST00000408722 82 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AL080243.2-201ENST00000418783 582 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 TSEN15P1-201ENST00000423257 515 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 TARDBPP1-201ENST00000442013 1203 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AL109954.1-202ENST00000564051 2148 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AC006486.2-201ENST00000624246 2199 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 Z92544.3-201ENST00000624747 417 ntBASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO1Q2MKA7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 AL589739.1-201ENST00000607720 493 ntBASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO1Q2MKA7 AC138035.3-201ENST00000622706 2791 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms