Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ACTA1P68133 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ACTA1P68133 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.29□□□□□ -0.12
ACTA1P68133 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.29□□□□□ -0.12
ACTA1P68133 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
ACTA1P68133 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 AC073439.1-201ENST00000624121 1774 ntBASIC14.29□□□□□ -0.12
ACTA1P68133 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.29□□□□□ -0.12
ACTA1P68133 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.29□□□□□ -0.12
ACTA1P68133 AC134407.2-201ENST00000625089 1978 ntBASIC14.29□□□□□ -0.12
ACTA1P68133 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ACTA1P68133 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ACTA1P68133 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ACTA1P68133 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.29□□□□□ -0.12
ACTA1P68133 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 AL136379.1-201ENST00000623471 2642 ntBASIC14.28□□□□□ -0.12
ACTA1P68133 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 LINC02228-204ENST00000642115 2962 ntBASIC14.28□□□□□ -0.12
ACTA1P68133 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.28□□□□□ -0.12
ACTA1P68133 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 UNC93B7-201ENST00000509439 705 ntBASIC14.28□□□□□ -0.12
ACTA1P68133 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 KRT126P-201ENST00000549467 1181 ntBASIC14.28□□□□□ -0.12
ACTA1P68133 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 AL691432.3-201ENST00000621860 400 ntBASIC14.28□□□□□ -0.12
ACTA1P68133 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.28□□□□□ -0.12
ACTA1P68133 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ACTA1P68133 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ACTA1P68133 C18orf15-201ENST00000623680 2534 ntBASIC14.28□□□□□ -0.12
ACTA1P68133 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ACTA1P68133 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTA1P68133 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.27□□□□□ -0.12
ACTA1P68133 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.27□□□□□ -0.12
ACTA1P68133 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ACTA1P68133 AC112693.3-201ENST00000624819 1983 ntBASIC14.27□□□□□ -0.12
ACTA1P68133 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTA1P68133 AC092127.1-201ENST00000567093 3455 ntBASIC14.27□□□□□ -0.12
ACTA1P68133 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ACTA1P68133 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.27□□□□□ -0.12
ACTA1P68133 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ACTA1P68133 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ACTA1P68133 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
ACTA1P68133 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ACTA1P68133 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms