Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 AL139011.1-202ENST00000642063 584 ntBASIC12.52□□□□□ -0.41
RAB5BP61020 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5BP61020 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5BP61020 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RAB5BP61020 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5BP61020 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5BP61020 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5BP61020 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.52□□□□□ -0.41
RAB5BP61020 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB5BP61020 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB5BP61020 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB5BP61020 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB5BP61020 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB5BP61020 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB5BP61020 AL050303.2-201ENST00000619798 666 ntBASIC12.51□□□□□ -0.41
RAB5BP61020 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
RAB5BP61020 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB5BP61020 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
RAB5BP61020 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB5BP61020 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB5BP61020 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
RAB5BP61020 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
RAB5BP61020 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
RAB5BP61020 MYCLP1-201ENST00000372451 1075 ntBASIC12.5□□□□□ -0.41
RAB5BP61020 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB5BP61020 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB5BP61020 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.5□□□□□ -0.41
RAB5BP61020 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB5BP61020 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB5BP61020 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB5BP61020 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB5BP61020 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms