Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.12■□□□□ 0.17
WNT3AP56704 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
WNT3AP56704 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.12■□□□□ 0.17
WNT3AP56704 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.12■□□□□ 0.17
WNT3AP56704 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.12■□□□□ 0.17
WNT3AP56704 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.12■□□□□ 0.17
WNT3AP56704 AL079307.3-201ENST00000556114 283 ntBASIC16.12■□□□□ 0.17
WNT3AP56704 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
WNT3AP56704 AC025678.2-201ENST00000562061 970 ntBASIC16.12■□□□□ 0.17
WNT3AP56704 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.12■□□□□ 0.17
WNT3AP56704 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.12■□□□□ 0.17
WNT3AP56704 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.12■□□□□ 0.17
WNT3AP56704 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
WNT3AP56704 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
WNT3AP56704 AC092850.2-201ENST00000623821 2697 ntBASIC16.12■□□□□ 0.17
WNT3AP56704 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.11■□□□□ 0.17
WNT3AP56704 CNN2P2-201ENST00000443536 909 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 CNN2P3-201ENST00000450201 906 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.11■□□□□ 0.17
WNT3AP56704 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.11■□□□□ 0.17
WNT3AP56704 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.11■□□□□ 0.17
WNT3AP56704 AL589739.1-201ENST00000607720 493 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 AL136317.3-201ENST00000618497 906 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 AC093028.1-201ENST00000622998 982 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
WNT3AP56704 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
WNT3AP56704 KRT8P12-202ENST00000472924 1397 ntBASIC16.11■□□□□ 0.17
WNT3AP56704 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
WNT3AP56704 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.11■□□□□ 0.17
WNT3AP56704 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.11■□□□□ 0.17
WNT3AP56704 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
WNT3AP56704 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.1■□□□□ 0.17
WNT3AP56704 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.1■□□□□ 0.17
WNT3AP56704 AL139384.1-201ENST00000612143 3047 ntBASIC16.1■□□□□ 0.17
WNT3AP56704 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
WNT3AP56704 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms