Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.73■□□□□ 0.11
PKNOX1P55347 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
PKNOX1P55347 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PKNOX1P55347 AL161772.1-201ENST00000610494 4412 ntBASIC15.73■□□□□ 0.11
PKNOX1P55347 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PKNOX1P55347 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.72■□□□□ 0.11
PKNOX1P55347 HLA-A-201ENST00000376802 1334 ntBASIC15.72■□□□□ 0.11
PKNOX1P55347 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.72■□□□□ 0.11
PKNOX1P55347 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.72■□□□□ 0.11
PKNOX1P55347 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.72■□□□□ 0.11
PKNOX1P55347 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.72■□□□□ 0.11
PKNOX1P55347 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 AC064836.3-201ENST00000607928 673 ntBASIC15.72■□□□□ 0.11
PKNOX1P55347 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.72■□□□□ 0.11
PKNOX1P55347 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.72■□□□□ 0.11
PKNOX1P55347 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PKNOX1P55347 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.71■□□□□ 0.11
PKNOX1P55347 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PKNOX1P55347 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PKNOX1P55347 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.71■□□□□ 0.11
PKNOX1P55347 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.71■□□□□ 0.11
PKNOX1P55347 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
PKNOX1P55347 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.71■□□□□ 0.11
PKNOX1P55347 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.71■□□□□ 0.11
PKNOX1P55347 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.71■□□□□ 0.11
PKNOX1P55347 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.71■□□□□ 0.11
PKNOX1P55347 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.71■□□□□ 0.11
PKNOX1P55347 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 AL109954.1-202ENST00000564051 2148 ntBASIC15.71■□□□□ 0.11
PKNOX1P55347 FAM45BP-202ENST00000592932 1624 ntBASIC15.71■□□□□ 0.11
PKNOX1P55347 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PKNOX1P55347 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PKNOX1P55347 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms