Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 MIR661-201ENST00000384842 89 ntBASIC17.41■□□□□ 0.38
NCKAP1LP55160 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 FAM8A3P-201ENST00000427218 844 ntBASIC17.41■□□□□ 0.38
NCKAP1LP55160 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.41■□□□□ 0.38
NCKAP1LP55160 AC135586.1-201ENST00000539323 574 ntBASIC17.41■□□□□ 0.38
NCKAP1LP55160 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 AC004790.1-201ENST00000612686 536 ntBASIC17.41■□□□□ 0.38
NCKAP1LP55160 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.41■□□□□ 0.38
NCKAP1LP55160 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCKAP1LP55160 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 KRT18P64-201ENST00000434946 1219 ntBASIC17.4■□□□□ 0.38
NCKAP1LP55160 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCKAP1LP55160 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.39■□□□□ 0.38
NCKAP1LP55160 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.39■□□□□ 0.38
NCKAP1LP55160 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.39■□□□□ 0.38
NCKAP1LP55160 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1LP55160 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NCKAP1LP55160 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.39■□□□□ 0.37
NCKAP1LP55160 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.39■□□□□ 0.37
NCKAP1LP55160 TSPY16P-201ENST00000449843 468 ntBASIC17.39■□□□□ 0.37
NCKAP1LP55160 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NCKAP1LP55160 SLED1-202ENST00000512051 380 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms