Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 KRT8P49-201ENST00000604166 1432 ntBASIC13.6□□□□□ -0.23
NKX2-5P52952 AP000692.2-201ENST00000608391 879 ntBASIC13.6□□□□□ -0.23
NKX2-5P52952 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-5P52952 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NKX2-5P52952 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.6□□□□□ -0.23
NKX2-5P52952 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-5P52952 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-5P52952 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-5P52952 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
NKX2-5P52952 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 AC011477.6-201ENST00000604980 1927 ntBASIC13.59□□□□□ -0.23
NKX2-5P52952 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-5P52952 B3GAT3P1-201ENST00000471720 806 ntBASIC13.59□□□□□ -0.23
NKX2-5P52952 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-5P52952 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.59□□□□□ -0.23
NKX2-5P52952 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 AL031985.4-201ENST00000642138 673 ntBASIC13.59□□□□□ -0.23
NKX2-5P52952 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
NKX2-5P52952 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-5P52952 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
NKX2-5P52952 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-5P52952 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-5P52952 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-5P52952 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-5P52952 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX2-5P52952 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.58□□□□□ -0.23
NKX2-5P52952 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.58□□□□□ -0.23
NKX2-5P52952 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.58□□□□□ -0.23
NKX2-5P52952 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.58□□□□□ -0.23
NKX2-5P52952 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX2-5P52952 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-5P52952 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
NKX2-5P52952 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.58□□□□□ -0.24
NKX2-5P52952 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX2-5P52952 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.58□□□□□ -0.24
NKX2-5P52952 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NKX2-5P52952 KSR1P1-201ENST00000446298 240 ntBASIC13.58□□□□□ -0.24
NKX2-5P52952 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX2-5P52952 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX2-5P52952 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX2-5P52952 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NKX2-5P52952 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NKX2-5P52952 AC010654.1-201ENST00000615722 808 ntBASIC13.58□□□□□ -0.24
NKX2-5P52952 MIR6786-201ENST00000616843 113 ntBASIC13.58□□□□□ -0.24
NKX2-5P52952 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-5P52952 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NKX2-5P52952 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX2-5P52952 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms