Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CASQ1P31415 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.23■□□□□ 0.35
CASQ1P31415 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ1P31415 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ1P31415 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ1P31415 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ1P31415 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.23■□□□□ 0.35
CASQ1P31415 FGD5P1-202ENST00000614866 2498 ntBASIC17.23■□□□□ 0.35
CASQ1P31415 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
CASQ1P31415 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASQ1P31415 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
CASQ1P31415 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CASQ1P31415 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.22■□□□□ 0.35
CASQ1P31415 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.22■□□□□ 0.35
CASQ1P31415 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CASQ1P31415 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ1P31415 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ1P31415 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.22■□□□□ 0.35
CASQ1P31415 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.22■□□□□ 0.35
CASQ1P31415 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ1P31415 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 TSSC2-201ENST00000450217 709 ntBASIC17.22■□□□□ 0.35
CASQ1P31415 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ1P31415 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 NKAPP1-205ENST00000585790 367 ntBASIC17.22■□□□□ 0.35
CASQ1P31415 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 KRT8P44-201ENST00000441609 1350 ntBASIC17.22■□□□□ 0.35
CASQ1P31415 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.22■□□□□ 0.35
CASQ1P31415 MROH4P-201ENST00000431302 1578 ntBASIC17.22■□□□□ 0.35
CASQ1P31415 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CASQ1P31415 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CASQ1P31415 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CASQ1P31415 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CASQ1P31415 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.21■□□□□ 0.35
CASQ1P31415 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 AC139887.3-201ENST00000568585 713 ntBASIC17.21■□□□□ 0.35
CASQ1P31415 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CASQ1P31415 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CASQ1P31415 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CASQ1P31415 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CASQ1P31415 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
CASQ1P31415 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
CASQ1P31415 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.21■□□□□ 0.34
CASQ1P31415 AC009090.5-201ENST00000624886 2285 ntBASIC17.21■□□□□ 0.34
CASQ1P31415 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CASQ1P31415 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CASQ1P31415 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CASQ1P31415 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ1P31415 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.2■□□□□ 0.34
CASQ1P31415 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.2■□□□□ 0.34
CASQ1P31415 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ1P31415 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ1P31415 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ1P31415 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ1P31415 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.2■□□□□ 0.34
CASQ1P31415 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CASQ1P31415 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.2■□□□□ 0.34
CASQ1P31415 AC092329.2-201ENST00000598402 547 ntBASIC17.2■□□□□ 0.34
CASQ1P31415 AP001269.4-201ENST00000609611 512 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms