Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CNGA1P29973 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CNGA1P29973 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNGA1P29973 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 ALOX12P2-203ENST00000570921 1945 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNGA1P29973 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNGA1P29973 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.13■□□□□ 0.49
CNGA1P29973 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.13■□□□□ 0.49
CNGA1P29973 TDH-203ENST00000531764 1110 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.13■□□□□ 0.49
CNGA1P29973 AL583810.1-201ENST00000553344 1045 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.13■□□□□ 0.49
CNGA1P29973 AC036164.1-201ENST00000570544 333 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.13■□□□□ 0.49
CNGA1P29973 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.13■□□□□ 0.49
CNGA1P29973 MIR6787-201ENST00000616675 61 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNGA1P29973 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 AC093525.8-201ENST00000624099 1342 ntBASIC18.13■□□□□ 0.49
CNGA1P29973 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.13■□□□□ 0.49
CNGA1P29973 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.13■□□□□ 0.49
CNGA1P29973 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.13■□□□□ 0.49
CNGA1P29973 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNGA1P29973 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
CNGA1P29973 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.13■□□□□ 0.49
CNGA1P29973 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNGA1P29973 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 AC005622.1-201ENST00000636801 1703 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 AL513477.1-201ENST00000602865 2407 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 AC018695.7-201ENST00000624587 2492 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.12■□□□□ 0.49
CNGA1P29973 HIST3H2BA-201ENST00000436555 524 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 AL162726.2-201ENST00000438986 1017 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNGA1P29973 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNGA1P29973 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.12■□□□□ 0.49
CNGA1P29973 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CNGA1P29973 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.12■□□□□ 0.49
CNGA1P29973 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNGA1P29973 PCGF3-213ENST00000620529 1899 ntBASIC18.12■□□□□ 0.49
CNGA1P29973 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CNGA1P29973 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.11■□□□□ 0.49
CNGA1P29973 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNGA1P29973 MIR1908-201ENST00000410394 80 ntBASIC18.11■□□□□ 0.49
CNGA1P29973 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.11■□□□□ 0.49
CNGA1P29973 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.11■□□□□ 0.49
CNGA1P29973 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms