Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH3P22223 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH3P22223 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH3P22223 TREML5P-201ENST00000421694 576 ntBASIC15.74■□□□□ 0.11
CDH3P22223 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH3P22223 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 AC093214.1-201ENST00000511688 1107 ntBASIC15.74■□□□□ 0.11
CDH3P22223 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH3P22223 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH3P22223 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH3P22223 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH3P22223 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.74■□□□□ 0.11
CDH3P22223 AC005498.2-205ENST00000593218 784 ntBASIC15.74■□□□□ 0.11
CDH3P22223 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.74■□□□□ 0.11
CDH3P22223 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDH3P22223 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH3P22223 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDH3P22223 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDH3P22223 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDH3P22223 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.74■□□□□ 0.11
CDH3P22223 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CDH3P22223 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH3P22223 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH3P22223 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.73■□□□□ 0.11
CDH3P22223 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH3P22223 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH3P22223 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 AC024267.1-201ENST00000582320 895 ntBASIC15.73■□□□□ 0.11
CDH3P22223 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.73■□□□□ 0.11
CDH3P22223 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
CDH3P22223 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.73■□□□□ 0.11
CDH3P22223 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 NORAD-201ENST00000565493 5339 ntBASIC15.73■□□□□ 0.11
CDH3P22223 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH3P22223 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CDH3P22223 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH3P22223 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDH3P22223 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 FAM45BP-202ENST00000592932 1624 ntBASIC15.72■□□□□ 0.11
CDH3P22223 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
CDH3P22223 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.72■□□□□ 0.11
CDH3P22223 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 AC005622.1-201ENST00000636801 1703 ntBASIC15.72■□□□□ 0.11
CDH3P22223 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH3P22223 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH3P22223 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH3P22223 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH3P22223 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms