Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.77■□□□□ 0.6
TOP1P11387 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TOP1P11387 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.77■□□□□ 0.6
TOP1P11387 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.77■□□□□ 0.6
TOP1P11387 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TOP1P11387 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.77■□□□□ 0.6
TOP1P11387 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.77■□□□□ 0.59
TOP1P11387 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TOP1P11387 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TOP1P11387 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TOP1P11387 BTBD7P1-201ENST00000447253 1453 ntBASIC18.77■□□□□ 0.59
TOP1P11387 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TOP1P11387 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.76■□□□□ 0.59
TOP1P11387 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TOP1P11387 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TOP1P11387 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 KRT8P37-201ENST00000451609 1420 ntBASIC18.76■□□□□ 0.59
TOP1P11387 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TOP1P11387 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TOP1P11387 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.76■□□□□ 0.59
TOP1P11387 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TOP1P11387 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 SERBP1P5-201ENST00000510079 1181 ntBASIC18.76■□□□□ 0.59
TOP1P11387 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.76■□□□□ 0.59
TOP1P11387 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.76■□□□□ 0.59
TOP1P11387 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 AC044860.1-202ENST00000559481 777 ntBASIC18.76■□□□□ 0.59
TOP1P11387 AC138761.1-201ENST00000584393 385 ntBASIC18.76■□□□□ 0.59
TOP1P11387 AC009118.2-201ENST00000613275 655 ntBASIC18.76■□□□□ 0.59
TOP1P11387 AC004840.1-201ENST00000636359 365 ntBASIC18.76■□□□□ 0.59
TOP1P11387 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TOP1P11387 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.76■□□□□ 0.59
TOP1P11387 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TOP1P11387 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TOP1P11387 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TOP1P11387 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.75■□□□□ 0.59
TOP1P11387 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.75■□□□□ 0.59
TOP1P11387 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.75■□□□□ 0.59
TOP1P11387 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 TERF1P3-201ENST00000505638 1227 ntBASIC18.75■□□□□ 0.59
TOP1P11387 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.75■□□□□ 0.59
TOP1P11387 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.75■□□□□ 0.59
TOP1P11387 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TOP1P11387 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.75■□□□□ 0.59
TOP1P11387 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TOP1P11387 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.75■□□□□ 0.59
TOP1P11387 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.75■□□□□ 0.59
TOP1P11387 PAUPAR-201ENST00000630360 2965 ntBASIC18.75■□□□□ 0.59
TOP1P11387 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
TOP1P11387 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 AL596087.1-201ENST00000400979 1969 ntBASIC18.75■□□□□ 0.59
TOP1P11387 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TOP1P11387 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TOP1P11387 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TOP1P11387 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TOP1P11387 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.74■□□□□ 0.59
TOP1P11387 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.74■□□□□ 0.59
TOP1P11387 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 413.9 ms