Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 IGHV3-65-201ENST00000523210 341 ntBASIC17.31■□□□□ 0.36
CCDC175P0C221 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC175P0C221 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC175P0C221 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CCDC175P0C221 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC175P0C221 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC175P0C221 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC175P0C221 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CCDC175P0C221 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 KRT8P44-201ENST00000441609 1350 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 AL390755.1-201ENST00000623716 2027 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC175P0C221 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC175P0C221 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC175P0C221 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCDC175P0C221 ACTL9-202ENST00000612068 1252 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC175P0C221 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 AC126365.1-201ENST00000578585 1514 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCDC175P0C221 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC175P0C221 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC175P0C221 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 AC232323.1-201ENST00000540724 2099 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 REXO1L5P-201ENST00000622260 2098 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 WASH6P-202ENST00000359512 1437 ntBASIC17.3■□□□□ 0.36
CCDC175P0C221 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC175P0C221 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC175P0C221 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
CCDC175P0C221 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC175P0C221 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 LINC00528-201ENST00000600723 2160 ntBASIC17.29■□□□□ 0.36
CCDC175P0C221 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC175P0C221 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC175P0C221 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC175P0C221 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC175P0C221 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC175P0C221 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC175P0C221 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC175P0C221 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC175P0C221 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC175P0C221 MIR4321-201ENST00000592276 80 ntBASIC17.29■□□□□ 0.36
CCDC175P0C221 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC175P0C221 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC175P0C221 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC175P0C221 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC175P0C221 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 AC007191.1-201ENST00000623179 2995 ntBASIC17.29■□□□□ 0.36
CCDC175P0C221 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC175P0C221 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms