Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
UPK1BO75841 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
UPK1BO75841 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UPK1BO75841 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UPK1BO75841 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK1BO75841 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK1BO75841 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 SIGLEC30P-201ENST00000455569 941 ntBASIC13.94□□□□□ -0.18
UPK1BO75841 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
UPK1BO75841 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.94□□□□□ -0.18
UPK1BO75841 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
UPK1BO75841 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UPK1BO75841 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK1BO75841 AC105206.1-202ENST00000314927 2368 ntBASIC13.94□□□□□ -0.18
UPK1BO75841 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK1BO75841 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.93□□□□□ -0.18
UPK1BO75841 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 C2orf69P3-201ENST00000565542 1120 ntBASIC13.93□□□□□ -0.18
UPK1BO75841 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 IKBKGP1-201ENST00000612193 1073 ntBASIC13.93□□□□□ -0.18
UPK1BO75841 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK1BO75841 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK1BO75841 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK1BO75841 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK1BO75841 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
UPK1BO75841 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK1BO75841 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms