Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CPNE3O75131 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 LINC01144-201ENST00000626198 1710 ntBASIC15.41■□□□□ 0.06
CPNE3O75131 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE3O75131 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE3O75131 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 RN7SL618P-201ENST00000477850 296 ntBASIC15.41■□□□□ 0.06
CPNE3O75131 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE3O75131 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE3O75131 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.41■□□□□ 0.06
CPNE3O75131 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.41■□□□□ 0.06
CPNE3O75131 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
CPNE3O75131 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPNE3O75131 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE3O75131 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE3O75131 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE3O75131 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE3O75131 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE3O75131 AC005225.4-201ENST00000557330 545 ntBASIC15.4■□□□□ 0.06
CPNE3O75131 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.4■□□□□ 0.06
CPNE3O75131 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE3O75131 AL358472.5-202ENST00000641448 1267 ntBASIC15.4■□□□□ 0.06
CPNE3O75131 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
CPNE3O75131 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.4■□□□□ 0.06
CPNE3O75131 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE3O75131 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE3O75131 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPNE3O75131 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPNE3O75131 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CPNE3O75131 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 DBET-201ENST00000630918 3363 ntBASIC15.39■□□□□ 0.05
CPNE3O75131 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms