Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH17O14917 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDH17O14917 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH17O14917 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDH17O14917 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDH17O14917 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDH17O14917 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
PCDH17O14917 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDH17O14917 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 AC104640.1-201ENST00000562617 2109 ntBASIC15.31■□□□□ 0.04
PCDH17O14917 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCDH17O14917 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDH17O14917 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDH17O14917 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 AC093214.1-201ENST00000511688 1107 ntBASIC15.3■□□□□ 0.04
PCDH17O14917 RNA5SP410-201ENST00000516285 106 ntBASIC15.3■□□□□ 0.04
PCDH17O14917 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDH17O14917 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
PCDH17O14917 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDH17O14917 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDH17O14917 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDH17O14917 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 AC003101.2-201ENST00000612557 442 ntBASIC15.3■□□□□ 0.04
PCDH17O14917 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
PCDH17O14917 AC073592.8-201ENST00000624126 511 ntBASIC15.3■□□□□ 0.04
PCDH17O14917 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDH17O14917 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDH17O14917 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDH17O14917 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 AC023824.1-201ENST00000562945 2975 ntBASIC15.3■□□□□ 0.04
PCDH17O14917 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDH17O14917 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 AL589702.1-201ENST00000641229 1509 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 POU5F1P6-201ENST00000466990 990 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 INGX-202ENST00000489074 768 ntBASIC15.29■□□□□ 0.04
PCDH17O14917 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH17O14917 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDH17O14917 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH17O14917 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDH17O14917 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDH17O14917 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
PCDH17O14917 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDH17O14917 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDH17O14917 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms