Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AL353135.1-201ENST00000606729 504 ntBASIC16.62■□□□□ 0.25
SRRM3A6NNA2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AC025580.3-201ENST00000617932 1424 ntBASIC16.62■□□□□ 0.25
SRRM3A6NNA2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 CRB3P1-201ENST00000449338 276 ntBASIC16.61■□□□□ 0.25
SRRM3A6NNA2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 RPS15P9-201ENST00000494093 319 ntBASIC16.61■□□□□ 0.25
SRRM3A6NNA2 STK19B-204ENST00000512515 211 ntBASIC16.61■□□□□ 0.25
SRRM3A6NNA2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 AC010654.1-201ENST00000615722 808 ntBASIC16.61■□□□□ 0.25
SRRM3A6NNA2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.61■□□□□ 0.25
SRRM3A6NNA2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 AC104581.4-201ENST00000623126 3052 ntBASIC16.61■□□□□ 0.25
SRRM3A6NNA2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SRRM3A6NNA2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 AC232323.1-201ENST00000540724 2099 ntBASIC16.6■□□□□ 0.25
SRRM3A6NNA2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.6■□□□□ 0.25
SRRM3A6NNA2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 AC003669.1-201ENST00000334569 611 ntBASIC16.6■□□□□ 0.25
SRRM3A6NNA2 NME2P1-201ENST00000426182 414 ntBASIC16.6■□□□□ 0.25
SRRM3A6NNA2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.6■□□□□ 0.25
SRRM3A6NNA2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.6■□□□□ 0.25
SRRM3A6NNA2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms