Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 AC092364.2-201ENST00000596710 2692 ntBASIC13.92□□□□□ -0.18
MBD3L3A6NE82 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MBD3L3A6NE82 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 MIR658-201ENST00000385210 100 ntBASIC13.91□□□□□ -0.18
MBD3L3A6NE82 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 TDH-203ENST00000531764 1110 ntBASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L3A6NE82 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 AC124067.4-201ENST00000519691 2379 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms