Protein–RNA interactions for Protein: A5D8V6

VPS37C, Vacuolar protein sorting-associated protein 37C, humanhuman

Predicted RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37CA5D8V6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 IL9RP2-201ENST00000423948 1312 ntBASIC18.69■□□□□ 0.58
VPS37CA5D8V6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
VPS37CA5D8V6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 AC138035.3-201ENST00000622706 2791 ntBASIC18.68■□□□□ 0.58
VPS37CA5D8V6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 AC002056.1-201ENST00000395613 760 ntBASIC18.68■□□□□ 0.58
VPS37CA5D8V6 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 AC092865.6-201ENST00000642101 219 ntBASIC18.68■□□□□ 0.58
VPS37CA5D8V6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS37CA5D8V6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS37CA5D8V6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS37CA5D8V6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms