Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NR2E3Q9Y5X4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NR2E3Q9Y5X4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NR2E3Q9Y5X4 AC091305.1-201ENST00000479476 895 ntBASIC26.34■■□□□ 1.81
NR2E3Q9Y5X4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NR2E3Q9Y5X4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NR2E3Q9Y5X4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NR2E3Q9Y5X4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NR2E3Q9Y5X4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.33■■□□□ 1.81
NR2E3Q9Y5X4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.33■■□□□ 1.81
NR2E3Q9Y5X4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NR2E3Q9Y5X4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NR2E3Q9Y5X4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.31■■□□□ 1.8
NR2E3Q9Y5X4 AC004448.1-201ENST00000458332 883 ntBASIC26.31■■□□□ 1.8
NR2E3Q9Y5X4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
NR2E3Q9Y5X4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NR2E3Q9Y5X4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NR2E3Q9Y5X4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.3■■□□□ 1.8
NR2E3Q9Y5X4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NR2E3Q9Y5X4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.3■■□□□ 1.8
NR2E3Q9Y5X4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.29■■□□□ 1.8
NR2E3Q9Y5X4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.29■■□□□ 1.8
NR2E3Q9Y5X4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.29■■□□□ 1.8
NR2E3Q9Y5X4 AP001330.3-201ENST00000520123 633 ntBASIC26.29■■□□□ 1.8
NR2E3Q9Y5X4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.29■■□□□ 1.8
NR2E3Q9Y5X4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NR2E3Q9Y5X4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 AC142086.6-201ENST00000621154 1765 ntBASIC26.28■■□□□ 1.8
NR2E3Q9Y5X4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NR2E3Q9Y5X4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.26■■□□□ 1.79
NR2E3Q9Y5X4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
NR2E3Q9Y5X4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NR2E3Q9Y5X4 DUX4L19-201ENST00000557448 1267 ntBASIC26.25■■□□□ 1.79
NR2E3Q9Y5X4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.25■■□□□ 1.79
NR2E3Q9Y5X4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.24■■□□□ 1.79
NR2E3Q9Y5X4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NR2E3Q9Y5X4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NR2E3Q9Y5X4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.23■■□□□ 1.79
NR2E3Q9Y5X4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NR2E3Q9Y5X4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.23■■□□□ 1.79
NR2E3Q9Y5X4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.23■■□□□ 1.79
NR2E3Q9Y5X4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NR2E3Q9Y5X4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NR2E3Q9Y5X4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.22■■□□□ 1.79
NR2E3Q9Y5X4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.22■■□□□ 1.79
NR2E3Q9Y5X4 AL137784.2-201ENST00000607332 1000 ntBASIC26.22■■□□□ 1.79
NR2E3Q9Y5X4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NR2E3Q9Y5X4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NR2E3Q9Y5X4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NR2E3Q9Y5X4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
NR2E3Q9Y5X4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.21■■□□□ 1.79
NR2E3Q9Y5X4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NR2E3Q9Y5X4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NR2E3Q9Y5X4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NR2E3Q9Y5X4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.2■■□□□ 1.78
NR2E3Q9Y5X4 MIR6722-201ENST00000617286 78 ntBASIC26.2■■□□□ 1.78
NR2E3Q9Y5X4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.2■■□□□ 1.78
NR2E3Q9Y5X4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 CA15P2-201ENST00000611168 834 ntBASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NR2E3Q9Y5X4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NR2E3Q9Y5X4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NR2E3Q9Y5X4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
NR2E3Q9Y5X4 RASA4CP-201ENST00000424092 1398 ntBASIC26.18■■□□□ 1.78
NR2E3Q9Y5X4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NR2E3Q9Y5X4 IRS3P-201ENST00000223076 1006 ntBASIC26.17■■□□□ 1.78
NR2E3Q9Y5X4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NR2E3Q9Y5X4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NR2E3Q9Y5X4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NR2E3Q9Y5X4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.16■■□□□ 1.78
NR2E3Q9Y5X4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.16■■□□□ 1.78
NR2E3Q9Y5X4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NR2E3Q9Y5X4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NR2E3Q9Y5X4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NR2E3Q9Y5X4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms