Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIT1Q9Y3P8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIT1Q9Y3P8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.92■■□□□ 1.42
SIT1Q9Y3P8 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.92■■□□□ 1.42
SIT1Q9Y3P8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIT1Q9Y3P8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
SIT1Q9Y3P8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIT1Q9Y3P8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.91■■□□□ 1.42
SIT1Q9Y3P8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.91■■□□□ 1.42
SIT1Q9Y3P8 AF213884.3-201ENST00000563833 479 ntBASIC23.91■■□□□ 1.42
SIT1Q9Y3P8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIT1Q9Y3P8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SIT1Q9Y3P8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SIT1Q9Y3P8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.9■■□□□ 1.42
SIT1Q9Y3P8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SIT1Q9Y3P8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.9■■□□□ 1.42
SIT1Q9Y3P8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SIT1Q9Y3P8 AC097381.1-201ENST00000429019 1296 ntBASIC23.89■■□□□ 1.41
SIT1Q9Y3P8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.89■■□□□ 1.41
SIT1Q9Y3P8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SIT1Q9Y3P8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.88■■□□□ 1.41
SIT1Q9Y3P8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.88■■□□□ 1.41
SIT1Q9Y3P8 MIR939-201ENST00000401314 82 ntBASIC23.88■■□□□ 1.41
SIT1Q9Y3P8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.88■■□□□ 1.41
SIT1Q9Y3P8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SIT1Q9Y3P8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.88■■□□□ 1.41
SIT1Q9Y3P8 AP004609.3-201ENST00000610705 1884 ntBASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 DUX4L19-201ENST00000557448 1267 ntBASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIT1Q9Y3P8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SIT1Q9Y3P8 AC004448.1-201ENST00000458332 883 ntBASIC23.86■■□□□ 1.41
SIT1Q9Y3P8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SIT1Q9Y3P8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SIT1Q9Y3P8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SIT1Q9Y3P8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SIT1Q9Y3P8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.85■■□□□ 1.41
SIT1Q9Y3P8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.85■■□□□ 1.41
SIT1Q9Y3P8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.85■■□□□ 1.41
SIT1Q9Y3P8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.85■■□□□ 1.41
SIT1Q9Y3P8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 FOXO3B-201ENST00000395675 1928 ntBASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 AC091305.1-201ENST00000479476 895 ntBASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SIT1Q9Y3P8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SIT1Q9Y3P8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SIT1Q9Y3P8 AL162430.1-201ENST00000480705 870 ntBASIC23.83■■□□□ 1.41
SIT1Q9Y3P8 AP001330.3-201ENST00000520123 633 ntBASIC23.83■■□□□ 1.41
SIT1Q9Y3P8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SIT1Q9Y3P8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 AC087623.3-201ENST00000607047 1098 ntBASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SIT1Q9Y3P8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SIT1Q9Y3P8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.8■■□□□ 1.4
SIT1Q9Y3P8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.8■■□□□ 1.4
SIT1Q9Y3P8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.8■■□□□ 1.4
SIT1Q9Y3P8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SIT1Q9Y3P8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SIT1Q9Y3P8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.79■■□□□ 1.4
SIT1Q9Y3P8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.79■■□□□ 1.4
SIT1Q9Y3P8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.79■■□□□ 1.4
SIT1Q9Y3P8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SIT1Q9Y3P8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 AC090877.2-201ENST00000558441 1738 ntBASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SIT1Q9Y3P8 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.77■■□□□ 1.4
SIT1Q9Y3P8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
SIT1Q9Y3P8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SIT1Q9Y3P8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SIT1Q9Y3P8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms