Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
SHANK2Q9UPX8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
SHANK2Q9UPX8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC35.5■■■■□ 3.27
SHANK2Q9UPX8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.5■■■■□ 3.27
SHANK2Q9UPX8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
SHANK2Q9UPX8 ERN1-208ENST00000606895 2068 ntBASIC35.49■■■■□ 3.27
SHANK2Q9UPX8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC35.49■■■■□ 3.27
SHANK2Q9UPX8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 SRR-208ENST00000576848 588 ntTSL 4 BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC35.48■■■■□ 3.27
SHANK2Q9UPX8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC35.47■■■■□ 3.27
SHANK2Q9UPX8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
SHANK2Q9UPX8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC35.47■■■■□ 3.27
SHANK2Q9UPX8 CD72-202ENST00000378430 585 ntTSL 3 BASIC35.47■■■■□ 3.27
SHANK2Q9UPX8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC35.47■■■■□ 3.27
SHANK2Q9UPX8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
SHANK2Q9UPX8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.27
SHANK2Q9UPX8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
SHANK2Q9UPX8 AC090877.2-201ENST00000558441 1738 ntBASIC35.46■■■■□ 3.27
SHANK2Q9UPX8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
SHANK2Q9UPX8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 AC097639.1-201ENST00000565519 1891 ntBASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC35.45■■■■□ 3.27
SHANK2Q9UPX8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC35.44■■■■□ 3.26
SHANK2Q9UPX8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
SHANK2Q9UPX8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
SHANK2Q9UPX8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC35.43■■■■□ 3.26
SHANK2Q9UPX8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
SHANK2Q9UPX8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC35.43■■■■□ 3.26
SHANK2Q9UPX8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC35.43■■■■□ 3.26
SHANK2Q9UPX8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
SHANK2Q9UPX8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC35.42■■■■□ 3.26
SHANK2Q9UPX8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.42■■■■□ 3.26
SHANK2Q9UPX8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC35.42■■■■□ 3.26
SHANK2Q9UPX8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 MIR4466-201ENST00000606121 54 ntBASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC35.41■■■■□ 3.26
SHANK2Q9UPX8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC35.4■■■■□ 3.26
SHANK2Q9UPX8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC35.4■■■■□ 3.26
SHANK2Q9UPX8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
SHANK2Q9UPX8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC35.4■■■■□ 3.26
SHANK2Q9UPX8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC35.4■■■■□ 3.26
SHANK2Q9UPX8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC35.39■■■■□ 3.26
SHANK2Q9UPX8 AL136116.3-201ENST00000402907 1138 ntBASIC35.39■■■■□ 3.26
SHANK2Q9UPX8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC35.39■■■■□ 3.26
SHANK2Q9UPX8 RASSF1-AS1-201ENST00000629828 790 ntBASIC35.39■■■■□ 3.26
SHANK2Q9UPX8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
SHANK2Q9UPX8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC35.38■■■■□ 3.25
SHANK2Q9UPX8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
SHANK2Q9UPX8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC35.38■■■■□ 3.25
SHANK2Q9UPX8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
SHANK2Q9UPX8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
SHANK2Q9UPX8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC35.37■■■■□ 3.25
SHANK2Q9UPX8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
SHANK2Q9UPX8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
SHANK2Q9UPX8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC35.36■■■■□ 3.25
SHANK2Q9UPX8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
SHANK2Q9UPX8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
SHANK2Q9UPX8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
SHANK2Q9UPX8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
SHANK2Q9UPX8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.35■■■■□ 3.25
SHANK2Q9UPX8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC35.34■■■■□ 3.25
SHANK2Q9UPX8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
SHANK2Q9UPX8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC35.33■■■■□ 3.25
SHANK2Q9UPX8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC35.33■■■■□ 3.25
SHANK2Q9UPX8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
SHANK2Q9UPX8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC35.33■■■■□ 3.25
SHANK2Q9UPX8 AC110285.6-201ENST00000617652 491 ntBASIC35.33■■■■□ 3.25
SHANK2Q9UPX8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC35.33■■■■□ 3.25
SHANK2Q9UPX8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC35.32■■■■□ 3.25
SHANK2Q9UPX8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
SHANK2Q9UPX8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC35.32■■■■□ 3.24
SHANK2Q9UPX8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
SHANK2Q9UPX8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC35.31■■■■□ 3.24
SHANK2Q9UPX8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC35.31■■■■□ 3.24
SHANK2Q9UPX8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
SHANK2Q9UPX8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
SHANK2Q9UPX8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC35.31■■■■□ 3.24
SHANK2Q9UPX8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC35.3■■■■□ 3.24
SHANK2Q9UPX8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC35.3■■■■□ 3.24
SHANK2Q9UPX8 AL356740.2-201ENST00000601559 647 ntBASIC35.3■■■■□ 3.24
SHANK2Q9UPX8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC35.3■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms