Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCF1Q9UBD9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.97■□□□□ 0.95
CLCF1Q9UBD9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLCF1Q9UBD9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCF1Q9UBD9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCF1Q9UBD9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.96■□□□□ 0.95
CLCF1Q9UBD9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCF1Q9UBD9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCF1Q9UBD9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 UNC93B8-201ENST00000511903 705 ntBASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 AC091060.1-201ENST00000623524 1766 ntBASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCF1Q9UBD9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCF1Q9UBD9 AC090877.2-201ENST00000558441 1738 ntBASIC20.93■□□□□ 0.94
CLCF1Q9UBD9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCF1Q9UBD9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCF1Q9UBD9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.93■□□□□ 0.94
CLCF1Q9UBD9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCF1Q9UBD9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 AC131212.1-201ENST00000613771 668 ntBASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCF1Q9UBD9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 AC145676.1-201ENST00000514988 2004 ntBASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 AC092028.1-203ENST00000608262 953 ntBASIC20.91■□□□□ 0.94
CLCF1Q9UBD9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 AF131216.4-201ENST00000638924 1588 ntBASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.9■□□□□ 0.94
CLCF1Q9UBD9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLCF1Q9UBD9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.89■□□□□ 0.94
CLCF1Q9UBD9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.89■□□□□ 0.94
CLCF1Q9UBD9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 TSPY9P-201ENST00000440215 945 ntBASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 TSPY11P-201ENST00000442607 1045 ntBASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLCF1Q9UBD9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 KRT16P3-201ENST00000439127 1283 ntBASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCF1Q9UBD9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLCF1Q9UBD9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCF1Q9UBD9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CLCF1Q9UBD9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.87■□□□□ 0.93
CLCF1Q9UBD9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCF1Q9UBD9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCF1Q9UBD9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLCF1Q9UBD9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms