Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNIP1Q9NZI2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KCNIP1Q9NZI2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.62■□□□□ 0.73
KCNIP1Q9NZI2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNIP1Q9NZI2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KCNIP1Q9NZI2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.62■□□□□ 0.73
KCNIP1Q9NZI2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 LINC01124-201ENST00000409786 2117 ntBASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 RAP2CP1-202ENST00000605179 643 ntBASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KCNIP1Q9NZI2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KCNIP1Q9NZI2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.6■□□□□ 0.73
KCNIP1Q9NZI2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KCNIP1Q9NZI2 AC026202.3-201ENST00000600805 1127 ntBASIC19.6■□□□□ 0.73
KCNIP1Q9NZI2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KCNIP1Q9NZI2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNIP1Q9NZI2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNIP1Q9NZI2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KCNIP1Q9NZI2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KCNIP1Q9NZI2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.58■□□□□ 0.73
KCNIP1Q9NZI2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.58■□□□□ 0.73
KCNIP1Q9NZI2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KCNIP1Q9NZI2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.58■□□□□ 0.72
KCNIP1Q9NZI2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KCNIP1Q9NZI2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNIP1Q9NZI2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KCNIP1Q9NZI2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP1Q9NZI2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP1Q9NZI2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP1Q9NZI2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP1Q9NZI2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KCNIP1Q9NZI2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
KCNIP1Q9NZI2 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.56■□□□□ 0.72
KCNIP1Q9NZI2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KCNIP1Q9NZI2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNIP1Q9NZI2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNIP1Q9NZI2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 AC133552.2-201ENST00000619106 1032 ntBASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 AC141586.4-201ENST00000624558 1573 ntBASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNIP1Q9NZI2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 RNF126P1-201ENST00000567452 1320 ntBASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 MIR6089-201ENST00000616698 64 ntBASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNIP1Q9NZI2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KCNIP1Q9NZI2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNIP1Q9NZI2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KCNIP1Q9NZI2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
KCNIP1Q9NZI2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
KCNIP1Q9NZI2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.52■□□□□ 0.72
KCNIP1Q9NZI2 LINC00543-201ENST00000567234 1845 ntBASIC19.52■□□□□ 0.72
KCNIP1Q9NZI2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
KCNIP1Q9NZI2 AC009831.1-201ENST00000580420 1582 ntBASIC19.51■□□□□ 0.71
KCNIP1Q9NZI2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNIP1Q9NZI2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNIP1Q9NZI2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KCNIP1Q9NZI2 FOXO3B-201ENST00000395675 1928 ntBASIC19.51■□□□□ 0.71
KCNIP1Q9NZI2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KCNIP1Q9NZI2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms