Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBFOX1Q9NWB1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RBFOX1Q9NWB1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBFOX1Q9NWB1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RBFOX1Q9NWB1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.58■□□□□ 0.89
RBFOX1Q9NWB1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBFOX1Q9NWB1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBFOX1Q9NWB1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RBFOX1Q9NWB1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.58■□□□□ 0.89
RBFOX1Q9NWB1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RBFOX1Q9NWB1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
RBFOX1Q9NWB1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RBFOX1Q9NWB1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBFOX1Q9NWB1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBFOX1Q9NWB1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 AC141586.4-201ENST00000624558 1573 ntBASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 AL117328.2-201ENST00000624617 1940 ntBASIC20.55■□□□□ 0.88
RBFOX1Q9NWB1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBFOX1Q9NWB1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 MIR639-201ENST00000384974 98 ntBASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBFOX1Q9NWB1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RBFOX1Q9NWB1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.51■□□□□ 0.87
RBFOX1Q9NWB1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RBFOX1Q9NWB1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RBFOX1Q9NWB1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBFOX1Q9NWB1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
RBFOX1Q9NWB1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RBFOX1Q9NWB1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RBFOX1Q9NWB1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 C9orf163-202ENST00000624034 2573 ntBASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.49■□□□□ 0.87
RBFOX1Q9NWB1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms