Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF146Q9NTX7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF146Q9NTX7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RNF146Q9NTX7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RNF146Q9NTX7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF146Q9NTX7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF146Q9NTX7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
RNF146Q9NTX7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF146Q9NTX7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.97■■□□□ 1.91
RNF146Q9NTX7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RNF146Q9NTX7 AC090877.2-201ENST00000558441 1738 ntBASIC26.96■■□□□ 1.91
RNF146Q9NTX7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RNF146Q9NTX7 AC092803.2-201ENST00000564287 1899 ntBASIC26.96■■□□□ 1.91
RNF146Q9NTX7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RNF146Q9NTX7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
RNF146Q9NTX7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
RNF146Q9NTX7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.95■■□□□ 1.9
RNF146Q9NTX7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.95■■□□□ 1.9
RNF146Q9NTX7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.94■■□□□ 1.9
RNF146Q9NTX7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
RNF146Q9NTX7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RNF146Q9NTX7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.92■■□□□ 1.9
RNF146Q9NTX7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RNF146Q9NTX7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF146Q9NTX7 MIR6724-1-201ENST00000616420 92 ntBASIC26.92■■□□□ 1.9
RNF146Q9NTX7 MIR6724-2-201ENST00000616483 92 ntBASIC26.92■■□□□ 1.9
RNF146Q9NTX7 MIR6724-4-201ENST00000617390 92 ntBASIC26.92■■□□□ 1.9
RNF146Q9NTX7 MIR6724-3-201ENST00000622482 92 ntBASIC26.92■■□□□ 1.9
RNF146Q9NTX7 AL117332.1-201ENST00000622628 974 ntBASIC26.92■■□□□ 1.9
RNF146Q9NTX7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RNF146Q9NTX7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RNF146Q9NTX7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RNF146Q9NTX7 AC019069.1-201ENST00000610008 1333 ntBASIC26.9■■□□□ 1.9
RNF146Q9NTX7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RNF146Q9NTX7 AC131281.2-201ENST00000520478 145 ntBASIC26.9■■□□□ 1.9
RNF146Q9NTX7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RNF146Q9NTX7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
RNF146Q9NTX7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF146Q9NTX7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RNF146Q9NTX7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF146Q9NTX7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
RNF146Q9NTX7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RNF146Q9NTX7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.89■■□□□ 1.9
RNF146Q9NTX7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.89■■□□□ 1.9
RNF146Q9NTX7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.88■■□□□ 1.89
RNF146Q9NTX7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RNF146Q9NTX7 MIR3621-201ENST00000580529 85 ntBASIC26.87■■□□□ 1.89
RNF146Q9NTX7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.87■■□□□ 1.89
RNF146Q9NTX7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF146Q9NTX7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF146Q9NTX7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF146Q9NTX7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.86■■□□□ 1.89
RNF146Q9NTX7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF146Q9NTX7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RNF146Q9NTX7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RNF146Q9NTX7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RNF146Q9NTX7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.85■■□□□ 1.89
RNF146Q9NTX7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.84■■□□□ 1.89
RNF146Q9NTX7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
RNF146Q9NTX7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RNF146Q9NTX7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.84■■□□□ 1.89
RNF146Q9NTX7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.84■■□□□ 1.89
RNF146Q9NTX7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.84■■□□□ 1.89
RNF146Q9NTX7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms