Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VRTNQ9H8Y1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
VRTNQ9H8Y1 AC022211.4-201ENST00000625094 2161 ntBASIC25.18■■□□□ 1.62
VRTNQ9H8Y1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
VRTNQ9H8Y1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
VRTNQ9H8Y1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
VRTNQ9H8Y1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
VRTNQ9H8Y1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.17■■□□□ 1.62
VRTNQ9H8Y1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
VRTNQ9H8Y1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 AL031848.2-201ENST00000607670 837 ntBASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
VRTNQ9H8Y1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
VRTNQ9H8Y1 THA1P-201ENST00000590384 1145 ntBASIC25.14■■□□□ 1.62
VRTNQ9H8Y1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
VRTNQ9H8Y1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 AC142381.3-201ENST00000568208 1670 ntBASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
VRTNQ9H8Y1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.12■■□□□ 1.61
VRTNQ9H8Y1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.12■■□□□ 1.61
VRTNQ9H8Y1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.12■■□□□ 1.61
VRTNQ9H8Y1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.12■■□□□ 1.61
VRTNQ9H8Y1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
VRTNQ9H8Y1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.11■■□□□ 1.61
VRTNQ9H8Y1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
VRTNQ9H8Y1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.1■■□□□ 1.61
VRTNQ9H8Y1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VRTNQ9H8Y1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.09■■□□□ 1.61
VRTNQ9H8Y1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.09■■□□□ 1.61
VRTNQ9H8Y1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
VRTNQ9H8Y1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
VRTNQ9H8Y1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VRTNQ9H8Y1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VRTNQ9H8Y1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
VRTNQ9H8Y1 MIR4281-201ENST00000580852 62 ntBASIC25.08■■□□□ 1.61
VRTNQ9H8Y1 AL451085.2-201ENST00000605085 799 ntBASIC25.08■■□□□ 1.61
VRTNQ9H8Y1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.08■■□□□ 1.6
VRTNQ9H8Y1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
VRTNQ9H8Y1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
VRTNQ9H8Y1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.07■■□□□ 1.6
VRTNQ9H8Y1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.07■■□□□ 1.6
VRTNQ9H8Y1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
VRTNQ9H8Y1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.07■■□□□ 1.6
VRTNQ9H8Y1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
VRTNQ9H8Y1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VRTNQ9H8Y1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
VRTNQ9H8Y1 AP003733.4-201ENST00000623785 1697 ntBASIC25.06■■□□□ 1.6
VRTNQ9H8Y1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.05■■□□□ 1.6
VRTNQ9H8Y1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
VRTNQ9H8Y1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
VRTNQ9H8Y1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.04■■□□□ 1.6
VRTNQ9H8Y1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
VRTNQ9H8Y1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
VRTNQ9H8Y1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
VRTNQ9H8Y1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
VRTNQ9H8Y1 AC137630.3-201ENST00000607245 391 ntBASIC25.03■■□□□ 1.6
VRTNQ9H8Y1 AC138932.3-201ENST00000567634 1902 ntBASIC25.03■■□□□ 1.6
VRTNQ9H8Y1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
VRTNQ9H8Y1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
VRTNQ9H8Y1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
VRTNQ9H8Y1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
VRTNQ9H8Y1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
VRTNQ9H8Y1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
VRTNQ9H8Y1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.02■■□□□ 1.6
VRTNQ9H8Y1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms