Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 DUX4L18-201ENST00000553347 1267 ntBASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL8AQ9BWD3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.02■□□□□ 0.79
RTL8AQ9BWD3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL8AQ9BWD3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RTL8AQ9BWD3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL8AQ9BWD3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL8AQ9BWD3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL8AQ9BWD3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTL8AQ9BWD3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL8AQ9BWD3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL8AQ9BWD3 AL592295.1-201ENST00000400984 884 ntBASIC20■□□□□ 0.79
RTL8AQ9BWD3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20■□□□□ 0.79
RTL8AQ9BWD3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTL8AQ9BWD3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20■□□□□ 0.79
RTL8AQ9BWD3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20■□□□□ 0.79
RTL8AQ9BWD3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20■□□□□ 0.79
RTL8AQ9BWD3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTL8AQ9BWD3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RTL8AQ9BWD3 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL8AQ9BWD3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 ATP5G2P3-201ENST00000429083 425 ntBASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 LONRF2P2-201ENST00000439212 571 ntBASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 BHLHE23-202ENST00000612929 1109 ntBASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 AL139125.2-201ENST00000623134 1869 ntBASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL8AQ9BWD3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 AC004987.1-201ENST00000428627 508 ntBASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL8AQ9BWD3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 AC135731.1-201ENST00000569415 2548 ntBASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 TSPY13P-201ENST00000338964 914 ntBASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 AC012354.3-201ENST00000623734 483 ntBASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RTL8AQ9BWD3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL8AQ9BWD3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL8AQ9BWD3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 AC019171.1-201ENST00000601251 1056 ntBASIC19.93■□□□□ 0.78
RTL8AQ9BWD3 AC074183.2-201ENST00000623112 922 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms