Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.5■□□□□ 0.87
VRK1Q99986 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 KRT18P10-201ENST00000388836 1287 ntBASIC20.5■□□□□ 0.87
VRK1Q99986 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.5■□□□□ 0.87
VRK1Q99986 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK1Q99986 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK1Q99986 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK1Q99986 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK1Q99986 AL035685.1-201ENST00000636663 812 ntBASIC20.49■□□□□ 0.87
VRK1Q99986 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK1Q99986 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VRK1Q99986 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
VRK1Q99986 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK1Q99986 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.48■□□□□ 0.87
VRK1Q99986 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VRK1Q99986 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
VRK1Q99986 MIR4508-201ENST00000584178 70 ntBASIC20.48■□□□□ 0.87
VRK1Q99986 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.48■□□□□ 0.87
VRK1Q99986 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK1Q99986 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VRK1Q99986 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VRK1Q99986 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.47■□□□□ 0.87
VRK1Q99986 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VRK1Q99986 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VRK1Q99986 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VRK1Q99986 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.47■□□□□ 0.87
VRK1Q99986 ERN1-208ENST00000606895 2068 ntBASIC20.47■□□□□ 0.87
VRK1Q99986 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
VRK1Q99986 AC133561.1-201ENST00000568600 2415 ntBASIC20.46■□□□□ 0.87
VRK1Q99986 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VRK1Q99986 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VRK1Q99986 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VRK1Q99986 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.46■□□□□ 0.87
VRK1Q99986 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VRK1Q99986 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VRK1Q99986 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VRK1Q99986 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
VRK1Q99986 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VRK1Q99986 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VRK1Q99986 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VRK1Q99986 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VRK1Q99986 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VRK1Q99986 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.44■□□□□ 0.86
VRK1Q99986 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.44■□□□□ 0.86
VRK1Q99986 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VRK1Q99986 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 AC019171.1-201ENST00000601251 1056 ntBASIC20.44■□□□□ 0.86
VRK1Q99986 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VRK1Q99986 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK1Q99986 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK1Q99986 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.43■□□□□ 0.86
VRK1Q99986 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK1Q99986 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.43■□□□□ 0.86
VRK1Q99986 LONRF2P2-201ENST00000439212 571 ntBASIC20.43■□□□□ 0.86
VRK1Q99986 AC009299.2-201ENST00000482477 511 ntBASIC20.43■□□□□ 0.86
VRK1Q99986 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK1Q99986 AL031848.2-201ENST00000607670 837 ntBASIC20.43■□□□□ 0.86
VRK1Q99986 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
VRK1Q99986 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VRK1Q99986 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
VRK1Q99986 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VRK1Q99986 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK1Q99986 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VRK1Q99986 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK1Q99986 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK1Q99986 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VRK1Q99986 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
VRK1Q99986 AC103724.3-201ENST00000564481 992 ntBASIC20.42■□□□□ 0.86
VRK1Q99986 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.42■□□□□ 0.86
VRK1Q99986 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.42■□□□□ 0.86
VRK1Q99986 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.42■□□□□ 0.86
VRK1Q99986 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VRK1Q99986 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VRK1Q99986 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VRK1Q99986 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VRK1Q99986 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.41■□□□□ 0.86
VRK1Q99986 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.41■□□□□ 0.86
VRK1Q99986 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.41■□□□□ 0.86
VRK1Q99986 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VRK1Q99986 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
VRK1Q99986 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VRK1Q99986 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VRK1Q99986 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VRK1Q99986 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VRK1Q99986 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VRK1Q99986 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms