Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC022413.1-201ENST00000624602 984 ntBASIC18.28■□□□□ 0.52
TRGV9Q99603 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV9Q99603 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRGV9Q99603 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.27■□□□□ 0.52
TRGV9Q99603 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.27■□□□□ 0.52
TRGV9Q99603 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.27■□□□□ 0.52
TRGV9Q99603 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRGV9Q99603 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.27■□□□□ 0.52
TRGV9Q99603 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRGV9Q99603 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRGV9Q99603 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.26■□□□□ 0.51
TRGV9Q99603 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV9Q99603 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.26■□□□□ 0.51
TRGV9Q99603 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.26■□□□□ 0.51
TRGV9Q99603 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV9Q99603 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV9Q99603 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV9Q99603 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV9Q99603 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRGV9Q99603 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRGV9Q99603 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV9Q99603 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV9Q99603 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV9Q99603 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TRGV9Q99603 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.25■□□□□ 0.51
TRGV9Q99603 AC007029.1-201ENST00000604183 313 ntBASIC18.25■□□□□ 0.51
TRGV9Q99603 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV9Q99603 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRGV9Q99603 AC004812.2-201ENST00000611079 2094 ntBASIC18.24■□□□□ 0.51
TRGV9Q99603 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV9Q99603 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV9Q99603 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.24■□□□□ 0.51
TRGV9Q99603 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV9Q99603 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV9Q99603 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRGV9Q99603 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.23■□□□□ 0.51
TRGV9Q99603 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV9Q99603 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV9Q99603 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV9Q99603 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV9Q99603 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRGV9Q99603 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.23■□□□□ 0.51
TRGV9Q99603 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
TRGV9Q99603 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRGV9Q99603 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV9Q99603 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRGV9Q99603 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.22■□□□□ 0.51
TRGV9Q99603 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.22■□□□□ 0.51
TRGV9Q99603 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV9Q99603 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.22■□□□□ 0.51
TRGV9Q99603 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRGV9Q99603 HLA-L-211ENST00000482052 1765 ntBASIC18.22■□□□□ 0.51
TRGV9Q99603 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV9Q99603 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRGV9Q99603 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRGV9Q99603 FOXO3B-201ENST00000395675 1928 ntBASIC18.21■□□□□ 0.51
TRGV9Q99603 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.21■□□□□ 0.51
TRGV9Q99603 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRGV9Q99603 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV9Q99603 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV9Q99603 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.21■□□□□ 0.51
TRGV9Q99603 RAP2CP1-202ENST00000605179 643 ntBASIC18.21■□□□□ 0.51
TRGV9Q99603 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV9Q99603 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRGV9Q99603 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRGV9Q99603 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRGV9Q99603 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.21■□□□□ 0.5
TRGV9Q99603 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV9Q99603 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV9Q99603 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRGV9Q99603 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRGV9Q99603 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.2■□□□□ 0.5
TRGV9Q99603 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.2■□□□□ 0.5
TRGV9Q99603 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRGV9Q99603 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV9Q99603 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV9Q99603 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRGV9Q99603 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRGV9Q99603 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV9Q99603 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRGV9Q99603 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV9Q99603 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV9Q99603 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
TRGV9Q99603 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.19■□□□□ 0.5
TRGV9Q99603 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV9Q99603 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.19■□□□□ 0.5
TRGV9Q99603 AC012676.1-201ENST00000574705 1949 ntBASIC18.19■□□□□ 0.5
TRGV9Q99603 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRGV9Q99603 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRGV9Q99603 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.18■□□□□ 0.5
TRGV9Q99603 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV9Q99603 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRGV9Q99603 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.18■□□□□ 0.5
TRGV9Q99603 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms