Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SMC6Q96SB8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC6Q96SB8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.68■■□□□ 1.38
SMC6Q96SB8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.68■■□□□ 1.38
SMC6Q96SB8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMC6Q96SB8 DUSP8P5-201ENST00000422884 1815 ntBASIC23.68■■□□□ 1.38
SMC6Q96SB8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.67■■□□□ 1.38
SMC6Q96SB8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.67■■□□□ 1.38
SMC6Q96SB8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.67■■□□□ 1.38
SMC6Q96SB8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.67■■□□□ 1.38
SMC6Q96SB8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC6Q96SB8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMC6Q96SB8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC6Q96SB8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
SMC6Q96SB8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMC6Q96SB8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMC6Q96SB8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SMC6Q96SB8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.66■■□□□ 1.38
SMC6Q96SB8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMC6Q96SB8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SMC6Q96SB8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
SMC6Q96SB8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC6Q96SB8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMC6Q96SB8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SMC6Q96SB8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC6Q96SB8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMC6Q96SB8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC6Q96SB8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMC6Q96SB8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMC6Q96SB8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.65■■□□□ 1.38
SMC6Q96SB8 MIR3648-2-201ENST00000581792 180 ntBASIC23.65■■□□□ 1.38
SMC6Q96SB8 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.65■■□□□ 1.38
SMC6Q96SB8 MIR3648-1-201ENST00000615959 180 ntBASIC23.65■■□□□ 1.38
SMC6Q96SB8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMC6Q96SB8 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.65■■□□□ 1.38
SMC6Q96SB8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.65■■□□□ 1.38
SMC6Q96SB8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.65■■□□□ 1.38
SMC6Q96SB8 AC004812.2-201ENST00000611079 2094 ntBASIC23.64■■□□□ 1.38
SMC6Q96SB8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMC6Q96SB8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
SMC6Q96SB8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC6Q96SB8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.64■■□□□ 1.37
SMC6Q96SB8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMC6Q96SB8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMC6Q96SB8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMC6Q96SB8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMC6Q96SB8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.63■■□□□ 1.37
SMC6Q96SB8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMC6Q96SB8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SMC6Q96SB8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMC6Q96SB8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMC6Q96SB8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMC6Q96SB8 MIR639-201ENST00000384974 98 ntBASIC23.63■■□□□ 1.37
SMC6Q96SB8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMC6Q96SB8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.63■■□□□ 1.37
SMC6Q96SB8 AC016575.1-201ENST00000607026 382 ntBASIC23.63■■□□□ 1.37
SMC6Q96SB8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.62■■□□□ 1.37
SMC6Q96SB8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.62■■□□□ 1.37
SMC6Q96SB8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.62■■□□□ 1.37
SMC6Q96SB8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SMC6Q96SB8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SMC6Q96SB8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC6Q96SB8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SMC6Q96SB8 AC126177.7-201ENST00000547904 679 ntBASIC23.61■■□□□ 1.37
SMC6Q96SB8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC6Q96SB8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.61■■□□□ 1.37
SMC6Q96SB8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SMC6Q96SB8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC6Q96SB8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMC6Q96SB8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC6Q96SB8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC6Q96SB8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMC6Q96SB8 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.6■■□□□ 1.37
SMC6Q96SB8 CR559946.2-201ENST00000623684 991 ntBASIC23.6■■□□□ 1.37
SMC6Q96SB8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.6■■□□□ 1.37
SMC6Q96SB8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.6■■□□□ 1.37
SMC6Q96SB8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC6Q96SB8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC6Q96SB8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC6Q96SB8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMC6Q96SB8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SMC6Q96SB8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SMC6Q96SB8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.58■■□□□ 1.37
SMC6Q96SB8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC6Q96SB8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC6Q96SB8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC6Q96SB8 MIR4449-201ENST00000578365 66 ntBASIC23.58■■□□□ 1.37
SMC6Q96SB8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.58■■□□□ 1.37
SMC6Q96SB8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMC6Q96SB8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMC6Q96SB8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMC6Q96SB8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.58■■□□□ 1.36
SMC6Q96SB8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.57■■□□□ 1.36
SMC6Q96SB8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
SMC6Q96SB8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SMC6Q96SB8 ABCB10P4-201ENST00000566803 2184 ntBASIC23.57■■□□□ 1.36
SMC6Q96SB8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC6Q96SB8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.56■■□□□ 1.36
SMC6Q96SB8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMC6Q96SB8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms