Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H2AAQ96QV6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2AAQ96QV6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.21■□□□□ 0.83
HIST1H2AAQ96QV6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2AAQ96QV6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.21■□□□□ 0.83
HIST1H2AAQ96QV6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIST1H2AAQ96QV6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.2■□□□□ 0.82
HIST1H2AAQ96QV6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AAQ96QV6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AAQ96QV6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 MIR6765-201ENST00000614092 87 ntBASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H2AAQ96QV6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HIST1H2AAQ96QV6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 RPS2P7-201ENST00000447334 885 ntBASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 U85056.1-201ENST00000616429 682 ntBASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 FOXO3B-201ENST00000395675 1928 ntBASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AAQ96QV6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIST1H2AAQ96QV6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
HIST1H2AAQ96QV6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H2AAQ96QV6 ABHD17AP5-201ENST00000580133 923 ntBASIC20.14■□□□□ 0.81
HIST1H2AAQ96QV6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIST1H2AAQ96QV6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST1H2AAQ96QV6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 DUX4L9-201ENST00000449051 1259 ntBASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST1H2AAQ96QV6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 SPCS2P3-201ENST00000500401 656 ntBASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST1H2AAQ96QV6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HIST1H2AAQ96QV6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST1H2AAQ96QV6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST1H2AAQ96QV6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms