Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.32■□□□□ 0.36
ODF3Q96PU9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.32■□□□□ 0.36
ODF3Q96PU9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.32■□□□□ 0.36
ODF3Q96PU9 AC018755.3-202ENST00000596210 929 ntBASIC17.32■□□□□ 0.36
ODF3Q96PU9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ODF3Q96PU9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 RPS2P7-201ENST00000447334 885 ntBASIC17.31■□□□□ 0.36
ODF3Q96PU9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ODF3Q96PU9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.31■□□□□ 0.36
ODF3Q96PU9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ODF3Q96PU9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.3■□□□□ 0.36
ODF3Q96PU9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ODF3Q96PU9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
ODF3Q96PU9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ODF3Q96PU9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.3■□□□□ 0.36
ODF3Q96PU9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ODF3Q96PU9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.3■□□□□ 0.36
ODF3Q96PU9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.29■□□□□ 0.36
ODF3Q96PU9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ODF3Q96PU9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.29■□□□□ 0.36
ODF3Q96PU9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF3Q96PU9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ODF3Q96PU9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ODF3Q96PU9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF3Q96PU9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ODF3Q96PU9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF3Q96PU9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ODF3Q96PU9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF3Q96PU9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ODF3Q96PU9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ODF3Q96PU9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.28■□□□□ 0.36
ODF3Q96PU9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.27■□□□□ 0.36
ODF3Q96PU9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.27■□□□□ 0.36
ODF3Q96PU9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ODF3Q96PU9 AL592293.1-201ENST00000502889 1188 ntBASIC17.27■□□□□ 0.36
ODF3Q96PU9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ODF3Q96PU9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ODF3Q96PU9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ODF3Q96PU9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ODF3Q96PU9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ODF3Q96PU9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ODF3Q96PU9 RARRES2P2-201ENST00000394842 485 ntBASIC17.26■□□□□ 0.35
ODF3Q96PU9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ODF3Q96PU9 AC087393.1-201ENST00000582896 145 ntBASIC17.26■□□□□ 0.35
ODF3Q96PU9 MIR6765-201ENST00000614092 87 ntBASIC17.26■□□□□ 0.35
ODF3Q96PU9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.26■□□□□ 0.35
ODF3Q96PU9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.26■□□□□ 0.35
ODF3Q96PU9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ODF3Q96PU9 HLA-L-211ENST00000482052 1765 ntBASIC17.25■□□□□ 0.35
ODF3Q96PU9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ODF3Q96PU9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ODF3Q96PU9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ODF3Q96PU9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.25■□□□□ 0.35
ODF3Q96PU9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ODF3Q96PU9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ODF3Q96PU9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ODF3Q96PU9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.25■□□□□ 0.35
ODF3Q96PU9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.25■□□□□ 0.35
ODF3Q96PU9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.24■□□□□ 0.35
ODF3Q96PU9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ODF3Q96PU9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ODF3Q96PU9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ODF3Q96PU9 AL592295.1-201ENST00000400984 884 ntBASIC17.24■□□□□ 0.35
ODF3Q96PU9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.24■□□□□ 0.35
ODF3Q96PU9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.24■□□□□ 0.35
ODF3Q96PU9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.24■□□□□ 0.35
ODF3Q96PU9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.23■□□□□ 0.35
ODF3Q96PU9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ODF3Q96PU9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ODF3Q96PU9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ODF3Q96PU9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ODF3Q96PU9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ODF3Q96PU9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.23■□□□□ 0.35
ODF3Q96PU9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ODF3Q96PU9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms