Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PHACTR3Q96KR7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.05■■■□□ 2.56
PHACTR3Q96KR7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PHACTR3Q96KR7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PHACTR3Q96KR7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PHACTR3Q96KR7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.04■■■□□ 2.56
PHACTR3Q96KR7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
PHACTR3Q96KR7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PHACTR3Q96KR7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 AF131216.4-201ENST00000638924 1588 ntBASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
PHACTR3Q96KR7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PHACTR3Q96KR7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PHACTR3Q96KR7 AL356441.2-201ENST00000443009 864 ntBASIC31.02■■■□□ 2.56
PHACTR3Q96KR7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
PHACTR3Q96KR7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PHACTR3Q96KR7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.01■■■□□ 2.56
PHACTR3Q96KR7 AC090877.2-201ENST00000558441 1738 ntBASIC31.01■■■□□ 2.56
PHACTR3Q96KR7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.56
PHACTR3Q96KR7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.01■■■□□ 2.55
PHACTR3Q96KR7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PHACTR3Q96KR7 UNC93B8-201ENST00000511903 705 ntBASIC31.01■■■□□ 2.55
PHACTR3Q96KR7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PHACTR3Q96KR7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31■■■□□ 2.55
PHACTR3Q96KR7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
PHACTR3Q96KR7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31■■■□□ 2.55
PHACTR3Q96KR7 KRT125P-201ENST00000546827 989 ntBASIC31■■■□□ 2.55
PHACTR3Q96KR7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31■■■□□ 2.55
PHACTR3Q96KR7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PHACTR3Q96KR7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.98■■■□□ 2.55
PHACTR3Q96KR7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PHACTR3Q96KR7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.98■■■□□ 2.55
PHACTR3Q96KR7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PHACTR3Q96KR7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.98■■■□□ 2.55
PHACTR3Q96KR7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.97■■■□□ 2.55
PHACTR3Q96KR7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.97■■■□□ 2.55
PHACTR3Q96KR7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.97■■■□□ 2.55
PHACTR3Q96KR7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PHACTR3Q96KR7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PHACTR3Q96KR7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.96■■■□□ 2.55
PHACTR3Q96KR7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PHACTR3Q96KR7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.95■■■□□ 2.55
PHACTR3Q96KR7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
PHACTR3Q96KR7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PHACTR3Q96KR7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.95■■■□□ 2.55
PHACTR3Q96KR7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
PHACTR3Q96KR7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.95■■■□□ 2.55
PHACTR3Q96KR7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
PHACTR3Q96KR7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
PHACTR3Q96KR7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.95■■■□□ 2.54
PHACTR3Q96KR7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.95■■■□□ 2.54
PHACTR3Q96KR7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
PHACTR3Q96KR7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
PHACTR3Q96KR7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PHACTR3Q96KR7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.94■■■□□ 2.54
PHACTR3Q96KR7 AC092028.1-203ENST00000608262 953 ntBASIC30.94■■■□□ 2.54
PHACTR3Q96KR7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PHACTR3Q96KR7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.93■■■□□ 2.54
PHACTR3Q96KR7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PHACTR3Q96KR7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PHACTR3Q96KR7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.92■■■□□ 2.54
PHACTR3Q96KR7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PHACTR3Q96KR7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
PHACTR3Q96KR7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PHACTR3Q96KR7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.91■■■□□ 2.54
PHACTR3Q96KR7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.91■■■□□ 2.54
PHACTR3Q96KR7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.91■■■□□ 2.54
PHACTR3Q96KR7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.91■■■□□ 2.54
PHACTR3Q96KR7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.91■■■□□ 2.54
PHACTR3Q96KR7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PHACTR3Q96KR7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 TSPY9P-201ENST00000440215 945 ntBASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 TSPY11P-201ENST00000442607 1045 ntBASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
PHACTR3Q96KR7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
PHACTR3Q96KR7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.88■■■□□ 2.53
PHACTR3Q96KR7 AC131212.1-201ENST00000613771 668 ntBASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms