Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC079834.2-201ENST00000609776 1949 ntBASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40AQ8WXH6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 NTF6A-201ENST00000591175 560 ntBASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB40AQ8WXH6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 DUSP8P5-201ENST00000422884 1815 ntBASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 SLC6A10P-202ENST00000431994 2058 ntBASIC20.49■□□□□ 0.87
RAB40AQ8WXH6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40AQ8WXH6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40AQ8WXH6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40AQ8WXH6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.47■□□□□ 0.87
RAB40AQ8WXH6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.47■□□□□ 0.87
RAB40AQ8WXH6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB40AQ8WXH6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RAB40AQ8WXH6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 SMPD5-203ENST00000639008 1464 ntBASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB40AQ8WXH6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RAB40AQ8WXH6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB40AQ8WXH6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB40AQ8WXH6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 AC007029.1-201ENST00000604183 313 ntBASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB40AQ8WXH6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 U85056.1-201ENST00000616429 682 ntBASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB40AQ8WXH6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB40AQ8WXH6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB40AQ8WXH6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms