Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L13-201ENST00000554103 1267 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L15-201ENST00000611059 1267 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L23-201ENST00000615195 1269 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L24-201ENST00000617576 1269 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L22-201ENST00000618238 1269 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L20-201ENST00000619712 1269 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L21-201ENST00000622058 1269 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L10-201ENST00000622460 1267 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 DUX4L25-201ENST00000624915 1269 ntBASIC21.26■□□□□ 0.99
APH1BQ8WW43 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
APH1BQ8WW43 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APH1BQ8WW43 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APH1BQ8WW43 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
APH1BQ8WW43 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.26■□□□□ 0.99
APH1BQ8WW43 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APH1BQ8WW43 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
APH1BQ8WW43 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.25■□□□□ 0.99
APH1BQ8WW43 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APH1BQ8WW43 HLA-V-202ENST00000446817 847 ntBASIC21.25■□□□□ 0.99
APH1BQ8WW43 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.25■□□□□ 0.99
APH1BQ8WW43 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APH1BQ8WW43 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
APH1BQ8WW43 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APH1BQ8WW43 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
APH1BQ8WW43 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.24■□□□□ 0.99
APH1BQ8WW43 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 LINC01971-201ENST00000617888 1048 ntBASIC21.24■□□□□ 0.99
APH1BQ8WW43 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.24■□□□□ 0.99
APH1BQ8WW43 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
APH1BQ8WW43 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
APH1BQ8WW43 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.23■□□□□ 0.99
APH1BQ8WW43 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
APH1BQ8WW43 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
APH1BQ8WW43 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
APH1BQ8WW43 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APH1BQ8WW43 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
APH1BQ8WW43 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
APH1BQ8WW43 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
APH1BQ8WW43 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
APH1BQ8WW43 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.22■□□□□ 0.99
APH1BQ8WW43 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APH1BQ8WW43 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
APH1BQ8WW43 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
APH1BQ8WW43 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
APH1BQ8WW43 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
APH1BQ8WW43 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
APH1BQ8WW43 AL117328.2-201ENST00000624617 1940 ntBASIC21.21■□□□□ 0.99
APH1BQ8WW43 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APH1BQ8WW43 HLA-L-211ENST00000482052 1765 ntBASIC21.21■□□□□ 0.99
APH1BQ8WW43 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.21■□□□□ 0.99
APH1BQ8WW43 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.21■□□□□ 0.99
APH1BQ8WW43 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
APH1BQ8WW43 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.21■□□□□ 0.99
APH1BQ8WW43 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APH1BQ8WW43 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
APH1BQ8WW43 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
APH1BQ8WW43 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.2■□□□□ 0.99
APH1BQ8WW43 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
APH1BQ8WW43 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APH1BQ8WW43 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APH1BQ8WW43 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APH1BQ8WW43 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.2■□□□□ 0.98
APH1BQ8WW43 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.2■□□□□ 0.98
APH1BQ8WW43 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APH1BQ8WW43 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
APH1BQ8WW43 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APH1BQ8WW43 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
APH1BQ8WW43 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.19■□□□□ 0.98
APH1BQ8WW43 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.19■□□□□ 0.98
APH1BQ8WW43 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.19■□□□□ 0.98
APH1BQ8WW43 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.19■□□□□ 0.98
APH1BQ8WW43 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
APH1BQ8WW43 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.18■□□□□ 0.98
APH1BQ8WW43 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APH1BQ8WW43 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
APH1BQ8WW43 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
APH1BQ8WW43 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APH1BQ8WW43 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APH1BQ8WW43 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APH1BQ8WW43 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.18■□□□□ 0.98
APH1BQ8WW43 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APH1BQ8WW43 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APH1BQ8WW43 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
APH1BQ8WW43 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms