Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21■□□□□ 0.95
SNX33Q8WV41 MIR3960-201ENST00000583311 91 ntBASIC21■□□□□ 0.95
SNX33Q8WV41 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21■□□□□ 0.95
SNX33Q8WV41 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21■□□□□ 0.95
SNX33Q8WV41 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX33Q8WV41 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX33Q8WV41 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX33Q8WV41 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SNX33Q8WV41 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX33Q8WV41 LINC00543-201ENST00000567234 1845 ntBASIC20.99■□□□□ 0.95
SNX33Q8WV41 AC025884.2-201ENST00000553429 711 ntBASIC20.98■□□□□ 0.95
SNX33Q8WV41 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX33Q8WV41 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX33Q8WV41 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX33Q8WV41 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX33Q8WV41 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.97■□□□□ 0.95
SNX33Q8WV41 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX33Q8WV41 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX33Q8WV41 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX33Q8WV41 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX33Q8WV41 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SNX33Q8WV41 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX33Q8WV41 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNX33Q8WV41 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SNX33Q8WV41 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX33Q8WV41 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX33Q8WV41 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX33Q8WV41 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SNX33Q8WV41 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SNX33Q8WV41 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX33Q8WV41 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SNX33Q8WV41 RP9P-202ENST00000450133 1212 ntBASIC20.95■□□□□ 0.94
SNX33Q8WV41 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.95■□□□□ 0.94
SNX33Q8WV41 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX33Q8WV41 NTF6A-201ENST00000591175 560 ntBASIC20.95■□□□□ 0.94
SNX33Q8WV41 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX33Q8WV41 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX33Q8WV41 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX33Q8WV41 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX33Q8WV41 AC141586.4-201ENST00000624558 1573 ntBASIC20.94■□□□□ 0.94
SNX33Q8WV41 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SNX33Q8WV41 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX33Q8WV41 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SNX33Q8WV41 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX33Q8WV41 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX33Q8WV41 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SNX33Q8WV41 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX33Q8WV41 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNX33Q8WV41 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX33Q8WV41 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX33Q8WV41 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SNX33Q8WV41 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX33Q8WV41 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX33Q8WV41 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX33Q8WV41 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SNX33Q8WV41 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX33Q8WV41 AC093536.1-201ENST00000569153 554 ntBASIC20.91■□□□□ 0.94
SNX33Q8WV41 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX33Q8WV41 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SNX33Q8WV41 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX33Q8WV41 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX33Q8WV41 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX33Q8WV41 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX33Q8WV41 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX33Q8WV41 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SNX33Q8WV41 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX33Q8WV41 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX33Q8WV41 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX33Q8WV41 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNX33Q8WV41 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms