Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.48■■□□□ 1.51
SH3RF2Q8TEC5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.48■■□□□ 1.51
SH3RF2Q8TEC5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SH3RF2Q8TEC5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH3RF2Q8TEC5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.46■■□□□ 1.51
SH3RF2Q8TEC5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.46■■□□□ 1.51
SH3RF2Q8TEC5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
SH3RF2Q8TEC5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SH3RF2Q8TEC5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.46■■□□□ 1.51
SH3RF2Q8TEC5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SH3RF2Q8TEC5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SH3RF2Q8TEC5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SH3RF2Q8TEC5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.44■■□□□ 1.5
SH3RF2Q8TEC5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SH3RF2Q8TEC5 AC091060.1-201ENST00000623524 1766 ntBASIC24.44■■□□□ 1.5
SH3RF2Q8TEC5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SH3RF2Q8TEC5 AC097639.1-201ENST00000565519 1891 ntBASIC24.43■■□□□ 1.5
SH3RF2Q8TEC5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.43■■□□□ 1.5
SH3RF2Q8TEC5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SH3RF2Q8TEC5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SH3RF2Q8TEC5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 AC008406.3-201ENST00000620001 1374 ntBASIC24.42■■□□□ 1.5
SH3RF2Q8TEC5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF2Q8TEC5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.41■■□□□ 1.5
SH3RF2Q8TEC5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.41■■□□□ 1.5
SH3RF2Q8TEC5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.41■■□□□ 1.5
SH3RF2Q8TEC5 AC010501.1-201ENST00000606270 1962 ntBASIC24.41■■□□□ 1.5
SH3RF2Q8TEC5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.4■■□□□ 1.5
SH3RF2Q8TEC5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF2Q8TEC5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.4■■□□□ 1.5
SH3RF2Q8TEC5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
SH3RF2Q8TEC5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.39■■□□□ 1.5
SH3RF2Q8TEC5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
SH3RF2Q8TEC5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
SH3RF2Q8TEC5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SH3RF2Q8TEC5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SH3RF2Q8TEC5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.39■■□□□ 1.49
SH3RF2Q8TEC5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SH3RF2Q8TEC5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.38■■□□□ 1.49
SH3RF2Q8TEC5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF2Q8TEC5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.38■■□□□ 1.49
SH3RF2Q8TEC5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF2Q8TEC5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF2Q8TEC5 AF131216.4-201ENST00000638924 1588 ntBASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 AC010997.5-201ENST00000609182 354 ntBASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SH3RF2Q8TEC5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
SH3RF2Q8TEC5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 AC092803.2-201ENST00000564287 1899 ntBASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 MTDHP2-201ENST00000601468 714 ntBASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 AC090877.2-201ENST00000558441 1738 ntBASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.35■■□□□ 1.49
SH3RF2Q8TEC5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH3RF2Q8TEC5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH3RF2Q8TEC5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH3RF2Q8TEC5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SH3RF2Q8TEC5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.34■■□□□ 1.49
SH3RF2Q8TEC5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SH3RF2Q8TEC5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms