Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD5Q8TDI0 AC022211.4-201ENST00000625094 2161 ntBASIC23.99■■□□□ 1.43
CHD5Q8TDI0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD5Q8TDI0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.97■■□□□ 1.43
CHD5Q8TDI0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD5Q8TDI0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD5Q8TDI0 YBX1P4-201ENST00000392794 808 ntBASIC23.97■■□□□ 1.43
CHD5Q8TDI0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.97■■□□□ 1.43
CHD5Q8TDI0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD5Q8TDI0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD5Q8TDI0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD5Q8TDI0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.96■■□□□ 1.43
CHD5Q8TDI0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHD5Q8TDI0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.96■■□□□ 1.43
CHD5Q8TDI0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.96■■□□□ 1.43
CHD5Q8TDI0 AC120024.1-201ENST00000562672 995 ntBASIC23.96■■□□□ 1.43
CHD5Q8TDI0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD5Q8TDI0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.95■■□□□ 1.42
CHD5Q8TDI0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD5Q8TDI0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD5Q8TDI0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CHD5Q8TDI0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.42
CHD5Q8TDI0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.42
CHD5Q8TDI0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD5Q8TDI0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD5Q8TDI0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHD5Q8TDI0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.93■■□□□ 1.42
CHD5Q8TDI0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHD5Q8TDI0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD5Q8TDI0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CHD5Q8TDI0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 AF131216.4-201ENST00000638924 1588 ntBASIC23.92■■□□□ 1.42
CHD5Q8TDI0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD5Q8TDI0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 Z92544.1-202ENST00000571933 1220 ntBASIC23.91■■□□□ 1.42
CHD5Q8TDI0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CHD5Q8TDI0 AL031848.2-201ENST00000607670 837 ntBASIC23.91■■□□□ 1.42
CHD5Q8TDI0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CHD5Q8TDI0 AC137630.3-201ENST00000607245 391 ntBASIC23.9■■□□□ 1.42
CHD5Q8TDI0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.9■■□□□ 1.42
CHD5Q8TDI0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHD5Q8TDI0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CHD5Q8TDI0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.42
CHD5Q8TDI0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHD5Q8TDI0 AC090877.2-201ENST00000558441 1738 ntBASIC23.89■■□□□ 1.42
CHD5Q8TDI0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD5Q8TDI0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD5Q8TDI0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.89■■□□□ 1.41
CHD5Q8TDI0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD5Q8TDI0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.88■■□□□ 1.41
CHD5Q8TDI0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD5Q8TDI0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CHD5Q8TDI0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD5Q8TDI0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD5Q8TDI0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.87■■□□□ 1.41
CHD5Q8TDI0 AL035685.1-201ENST00000636663 812 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms