Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HMGCLL1Q8TB92 AC097639.1-201ENST00000565519 1891 ntBASIC23.07■■□□□ 1.28
HMGCLL1Q8TB92 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCLL1Q8TB92 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCLL1Q8TB92 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGCLL1Q8TB92 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 AC074183.2-201ENST00000623112 922 ntBASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
HMGCLL1Q8TB92 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
HMGCLL1Q8TB92 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLL1Q8TB92 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.04■■□□□ 1.28
HMGCLL1Q8TB92 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLL1Q8TB92 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLL1Q8TB92 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HMGCLL1Q8TB92 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 AC019171.1-201ENST00000601251 1056 ntBASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HMGCLL1Q8TB92 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 LONRF2P2-201ENST00000439212 571 ntBASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HMGCLL1Q8TB92 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 LINC01124-201ENST00000409786 2117 ntBASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 AC139795.1-202ENST00000500444 432 ntBASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HMGCLL1Q8TB92 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HMGCLL1Q8TB92 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23■■□□□ 1.27
HMGCLL1Q8TB92 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23■■□□□ 1.27
HMGCLL1Q8TB92 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23■■□□□ 1.27
HMGCLL1Q8TB92 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23■■□□□ 1.27
HMGCLL1Q8TB92 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23■■□□□ 1.27
HMGCLL1Q8TB92 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLL1Q8TB92 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLL1Q8TB92 SLC6A10P-202ENST00000431994 2058 ntBASIC22.99■■□□□ 1.27
HMGCLL1Q8TB92 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.99■■□□□ 1.27
HMGCLL1Q8TB92 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
HMGCLL1Q8TB92 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.99■■□□□ 1.27
HMGCLL1Q8TB92 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HMGCLL1Q8TB92 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms