Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.56■■■□□ 2
SMARCC2Q8TAQ2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SMARCC2Q8TAQ2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.56■■■□□ 2
SMARCC2Q8TAQ2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
SMARCC2Q8TAQ2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.55■■■□□ 2
SMARCC2Q8TAQ2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.55■■■□□ 2
SMARCC2Q8TAQ2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC27.55■■■□□ 2
SMARCC2Q8TAQ2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SMARCC2Q8TAQ2 RPS2P7-201ENST00000447334 885 ntBASIC27.54■■■□□ 2
SMARCC2Q8TAQ2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.54■■■□□ 2
SMARCC2Q8TAQ2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SMARCC2Q8TAQ2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.53■■■□□ 2
SMARCC2Q8TAQ2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.53■■■□□ 2
SMARCC2Q8TAQ2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.53■■■□□ 2
SMARCC2Q8TAQ2 KRT18P10-201ENST00000388836 1287 ntBASIC27.53■■■□□ 2
SMARCC2Q8TAQ2 AC087393.1-201ENST00000582896 145 ntBASIC27.53■■■□□ 2
SMARCC2Q8TAQ2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 MIR6089-201ENST00000616698 64 ntBASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SMARCC2Q8TAQ2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■■□□ 2
SMARCC2Q8TAQ2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.51■■□□□ 1.99
SMARCC2Q8TAQ2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMARCC2Q8TAQ2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SMARCC2Q8TAQ2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMARCC2Q8TAQ2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMARCC2Q8TAQ2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SMARCC2Q8TAQ2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SMARCC2Q8TAQ2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 RARRES2P1-201ENST00000474487 481 ntBASIC27.49■■□□□ 1.99
SMARCC2Q8TAQ2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCC2Q8TAQ2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCC2Q8TAQ2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCC2Q8TAQ2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.48■■□□□ 1.99
SMARCC2Q8TAQ2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SMARCC2Q8TAQ2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
SMARCC2Q8TAQ2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.47■■□□□ 1.99
SMARCC2Q8TAQ2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.47■■□□□ 1.99
SMARCC2Q8TAQ2 PVT1_1.1-201ENST00000615125 194 ntBASIC27.47■■□□□ 1.99
SMARCC2Q8TAQ2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
SMARCC2Q8TAQ2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC2Q8TAQ2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.46■■□□□ 1.99
SMARCC2Q8TAQ2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.46■■□□□ 1.99
SMARCC2Q8TAQ2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC2Q8TAQ2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
SMARCC2Q8TAQ2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SMARCC2Q8TAQ2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.99
SMARCC2Q8TAQ2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMARCC2Q8TAQ2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
SMARCC2Q8TAQ2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
SMARCC2Q8TAQ2 KRT8P33-201ENST00000508125 1423 ntBASIC27.45■■□□□ 1.98
SMARCC2Q8TAQ2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCC2Q8TAQ2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.45■■□□□ 1.98
SMARCC2Q8TAQ2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCC2Q8TAQ2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SMARCC2Q8TAQ2 LINC01124-201ENST00000409786 2117 ntBASIC27.44■■□□□ 1.98
SMARCC2Q8TAQ2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC2Q8TAQ2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC2Q8TAQ2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.44■■□□□ 1.98
SMARCC2Q8TAQ2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SMARCC2Q8TAQ2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SMARCC2Q8TAQ2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.42■■□□□ 1.98
SMARCC2Q8TAQ2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 FOXO3B-201ENST00000395675 1928 ntBASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SMARCC2Q8TAQ2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms