Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
BBS1Q8NFJ9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 SMPD5-203ENST00000639008 1464 ntBASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 MIR6089-201ENST00000616698 64 ntBASIC21.08■□□□□ 0.97
BBS1Q8NFJ9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BBS1Q8NFJ9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BBS1Q8NFJ9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BBS1Q8NFJ9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.06■□□□□ 0.96
BBS1Q8NFJ9 AC068473.5-201ENST00000616428 2072 ntBASIC21.06■□□□□ 0.96
BBS1Q8NFJ9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.06■□□□□ 0.96
BBS1Q8NFJ9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BBS1Q8NFJ9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 AC092296.2-201ENST00000589470 999 ntBASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BBS1Q8NFJ9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BBS1Q8NFJ9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BBS1Q8NFJ9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.01■□□□□ 0.95
BBS1Q8NFJ9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21■□□□□ 0.95
BBS1Q8NFJ9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
BBS1Q8NFJ9 HLA-L-211ENST00000482052 1765 ntBASIC21■□□□□ 0.95
BBS1Q8NFJ9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BBS1Q8NFJ9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
BBS1Q8NFJ9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BBS1Q8NFJ9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BBS1Q8NFJ9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21■□□□□ 0.95
BBS1Q8NFJ9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 AC012676.1-201ENST00000574705 1949 ntBASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BBS1Q8NFJ9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BBS1Q8NFJ9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BBS1Q8NFJ9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
BBS1Q8NFJ9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BBS1Q8NFJ9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BBS1Q8NFJ9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BBS1Q8NFJ9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms