Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF169Q8NCN4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF169Q8NCN4 AC096887.2-201ENST00000623443 1957 ntBASIC25.6■■□□□ 1.69
RNF169Q8NCN4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.6■■□□□ 1.69
RNF169Q8NCN4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.6■■□□□ 1.69
RNF169Q8NCN4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.6■■□□□ 1.69
RNF169Q8NCN4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF169Q8NCN4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF169Q8NCN4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF169Q8NCN4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
RNF169Q8NCN4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.58■■□□□ 1.69
RNF169Q8NCN4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
RNF169Q8NCN4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.57■■□□□ 1.68
RNF169Q8NCN4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RNF169Q8NCN4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.57■■□□□ 1.68
RNF169Q8NCN4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF169Q8NCN4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF169Q8NCN4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF169Q8NCN4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF169Q8NCN4 AC097639.1-201ENST00000565519 1891 ntBASIC25.55■■□□□ 1.68
RNF169Q8NCN4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF169Q8NCN4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF169Q8NCN4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF169Q8NCN4 AF131216.4-201ENST00000638924 1588 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 AC131281.2-201ENST00000520478 145 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF169Q8NCN4 MIR6724-1-201ENST00000616420 92 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 MIR6724-2-201ENST00000616483 92 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 MIR6724-4-201ENST00000617390 92 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 MIR6724-3-201ENST00000622482 92 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 AL117332.1-201ENST00000622628 974 ntBASIC25.52■■□□□ 1.68
RNF169Q8NCN4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
RNF169Q8NCN4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.5■■□□□ 1.67
RNF169Q8NCN4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF169Q8NCN4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
RNF169Q8NCN4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.5■■□□□ 1.67
RNF169Q8NCN4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.5■■□□□ 1.67
RNF169Q8NCN4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.49■■□□□ 1.67
RNF169Q8NCN4 AC090877.2-201ENST00000558441 1738 ntBASIC25.49■■□□□ 1.67
RNF169Q8NCN4 AC010501.1-201ENST00000606270 1962 ntBASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms