Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 MTDHP2-201ENST00000601468 714 ntBASIC24■■□□□ 1.43
SFTPA1Q8IWL2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24■■□□□ 1.43
SFTPA1Q8IWL2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SFTPA1Q8IWL2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SFTPA1Q8IWL2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.99■■□□□ 1.43
SFTPA1Q8IWL2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SFTPA1Q8IWL2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SFTPA1Q8IWL2 MIR3621-201ENST00000580529 85 ntBASIC23.98■■□□□ 1.43
SFTPA1Q8IWL2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SFTPA1Q8IWL2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SFTPA1Q8IWL2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SFTPA1Q8IWL2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
SFTPA1Q8IWL2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 MIR6724-1-201ENST00000616420 92 ntBASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 MIR6724-2-201ENST00000616483 92 ntBASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 MIR6724-4-201ENST00000617390 92 ntBASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 MIR6724-3-201ENST00000622482 92 ntBASIC23.97■■□□□ 1.43
SFTPA1Q8IWL2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SFTPA1Q8IWL2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
SFTPA1Q8IWL2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SFTPA1Q8IWL2 MIR638-201ENST00000385237 100 ntBASIC23.96■■□□□ 1.43
SFTPA1Q8IWL2 AL136116.3-201ENST00000402907 1138 ntBASIC23.96■■□□□ 1.43
SFTPA1Q8IWL2 MIR4466-201ENST00000606121 54 ntBASIC23.96■■□□□ 1.43
SFTPA1Q8IWL2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SFTPA1Q8IWL2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
SFTPA1Q8IWL2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
SFTPA1Q8IWL2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.95■■□□□ 1.42
SFTPA1Q8IWL2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.94■■□□□ 1.42
SFTPA1Q8IWL2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SFTPA1Q8IWL2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
SFTPA1Q8IWL2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.94■■□□□ 1.42
SFTPA1Q8IWL2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.94■■□□□ 1.42
SFTPA1Q8IWL2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SFTPA1Q8IWL2 AL121749.1-202ENST00000609313 2153 ntBASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 AC097639.1-201ENST00000565519 1891 ntBASIC23.93■■□□□ 1.42
SFTPA1Q8IWL2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SFTPA1Q8IWL2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 AC090877.2-201ENST00000558441 1738 ntBASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 AC010501.1-201ENST00000606270 1962 ntBASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SFTPA1Q8IWL2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.9■■□□□ 1.42
SFTPA1Q8IWL2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.9■■□□□ 1.42
SFTPA1Q8IWL2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SFTPA1Q8IWL2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.9■■□□□ 1.42
SFTPA1Q8IWL2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SFTPA1Q8IWL2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SFTPA1Q8IWL2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SFTPA1Q8IWL2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SFTPA1Q8IWL2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
SFTPA1Q8IWL2 MIR935-201ENST00000401179 91 ntBASIC23.89■■□□□ 1.41
SFTPA1Q8IWL2 AL512631.2-201ENST00000604634 923 ntBASIC23.89■■□□□ 1.41
SFTPA1Q8IWL2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SFTPA1Q8IWL2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms