Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.01■■□□□ 1.75
SFR1Q86XK3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.01■■□□□ 1.75
SFR1Q86XK3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SFR1Q86XK3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SFR1Q86XK3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SFR1Q86XK3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SFR1Q86XK3 AC019171.1-201ENST00000601251 1056 ntBASIC26.01■■□□□ 1.75
SFR1Q86XK3 MIR6089-201ENST00000616698 64 ntBASIC26.01■■□□□ 1.75
SFR1Q86XK3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SFR1Q86XK3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26■■□□□ 1.75
SFR1Q86XK3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SFR1Q86XK3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SFR1Q86XK3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SFR1Q86XK3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26■■□□□ 1.75
SFR1Q86XK3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26■■□□□ 1.75
SFR1Q86XK3 AL592295.1-201ENST00000400984 884 ntBASIC26■■□□□ 1.75
SFR1Q86XK3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26■■□□□ 1.75
SFR1Q86XK3 AC074183.2-201ENST00000623112 922 ntBASIC26■■□□□ 1.75
SFR1Q86XK3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26■■□□□ 1.75
SFR1Q86XK3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.99■■□□□ 1.75
SFR1Q86XK3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SFR1Q86XK3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SFR1Q86XK3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SFR1Q86XK3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SFR1Q86XK3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SFR1Q86XK3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
SFR1Q86XK3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SFR1Q86XK3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SFR1Q86XK3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SFR1Q86XK3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SFR1Q86XK3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SFR1Q86XK3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.97■■□□□ 1.75
SFR1Q86XK3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SFR1Q86XK3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.97■■□□□ 1.75
SFR1Q86XK3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SFR1Q86XK3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SFR1Q86XK3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.96■■□□□ 1.75
SFR1Q86XK3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.96■■□□□ 1.75
SFR1Q86XK3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SFR1Q86XK3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.96■■□□□ 1.75
SFR1Q86XK3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
SFR1Q86XK3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SFR1Q86XK3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.95■■□□□ 1.74
SFR1Q86XK3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.95■■□□□ 1.74
SFR1Q86XK3 AP003733.4-201ENST00000623785 1697 ntBASIC25.95■■□□□ 1.74
SFR1Q86XK3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SFR1Q86XK3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SFR1Q86XK3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SFR1Q86XK3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.94■■□□□ 1.74
SFR1Q86XK3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SFR1Q86XK3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SFR1Q86XK3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SFR1Q86XK3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.94■■□□□ 1.74
SFR1Q86XK3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SFR1Q86XK3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.93■■□□□ 1.74
SFR1Q86XK3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SFR1Q86XK3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.93■■□□□ 1.74
SFR1Q86XK3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SFR1Q86XK3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SFR1Q86XK3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SFR1Q86XK3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.93■■□□□ 1.74
SFR1Q86XK3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SFR1Q86XK3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SFR1Q86XK3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
SFR1Q86XK3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SFR1Q86XK3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.92■■□□□ 1.74
SFR1Q86XK3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SFR1Q86XK3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
SFR1Q86XK3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SFR1Q86XK3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SFR1Q86XK3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SFR1Q86XK3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SFR1Q86XK3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SFR1Q86XK3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.92■■□□□ 1.74
SFR1Q86XK3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.92■■□□□ 1.74
SFR1Q86XK3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SFR1Q86XK3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.91■■□□□ 1.74
SFR1Q86XK3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SFR1Q86XK3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SFR1Q86XK3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.91■■□□□ 1.74
SFR1Q86XK3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SFR1Q86XK3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.91■■□□□ 1.74
SFR1Q86XK3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
SFR1Q86XK3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
SFR1Q86XK3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
SFR1Q86XK3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.9■■□□□ 1.74
SFR1Q86XK3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SFR1Q86XK3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SFR1Q86XK3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SFR1Q86XK3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SFR1Q86XK3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.89■■□□□ 1.74
SFR1Q86XK3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SFR1Q86XK3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.89■■□□□ 1.74
SFR1Q86XK3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
SFR1Q86XK3 KRT8P33-201ENST00000508125 1423 ntBASIC25.88■■□□□ 1.73
SFR1Q86XK3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SFR1Q86XK3 AL139125.2-201ENST00000623134 1869 ntBASIC25.88■■□□□ 1.73
SFR1Q86XK3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SFR1Q86XK3 AC103834.1-201ENST00000520383 144 ntBASIC25.88■■□□□ 1.73
SFR1Q86XK3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms