Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3HC1Q86WB0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3HC1Q86WB0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.36■■□□□ 1.33
ZC3HC1Q86WB0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.36■■□□□ 1.33
ZC3HC1Q86WB0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.36■■□□□ 1.33
ZC3HC1Q86WB0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3HC1Q86WB0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3HC1Q86WB0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3HC1Q86WB0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
ZC3HC1Q86WB0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.33■■□□□ 1.33
ZC3HC1Q86WB0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3HC1Q86WB0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3HC1Q86WB0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ZC3HC1Q86WB0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
ZC3HC1Q86WB0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
ZC3HC1Q86WB0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZC3HC1Q86WB0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
ZC3HC1Q86WB0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
ZC3HC1Q86WB0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
ZC3HC1Q86WB0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 HLA-L-211ENST00000482052 1765 ntBASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 AC004812.2-201ENST00000611079 2094 ntBASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3HC1Q86WB0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3HC1Q86WB0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZC3HC1Q86WB0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3HC1Q86WB0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3HC1Q86WB0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3HC1Q86WB0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3HC1Q86WB0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZC3HC1Q86WB0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZC3HC1Q86WB0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.27■■□□□ 1.31
ZC3HC1Q86WB0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 SPCS2P3-201ENST00000500401 656 ntBASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 AL592293.1-201ENST00000502889 1188 ntBASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZC3HC1Q86WB0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.25■■□□□ 1.31
ZC3HC1Q86WB0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 RPS2P7-201ENST00000447334 885 ntBASIC23.24■■□□□ 1.31
ZC3HC1Q86WB0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms