Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS13CQ709C8 AL136967.2-201ENST00000623968 743 ntBASIC19.88■□□□□ 0.77
VPS13CQ709C8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS13CQ709C8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS13CQ709C8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
VPS13CQ709C8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.87■□□□□ 0.77
VPS13CQ709C8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
VPS13CQ709C8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS13CQ709C8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.87■□□□□ 0.77
VPS13CQ709C8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS13CQ709C8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VPS13CQ709C8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS13CQ709C8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.86■□□□□ 0.77
VPS13CQ709C8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS13CQ709C8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS13CQ709C8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VPS13CQ709C8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.86■□□□□ 0.77
VPS13CQ709C8 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.86■□□□□ 0.77
VPS13CQ709C8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VPS13CQ709C8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
VPS13CQ709C8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS13CQ709C8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.85■□□□□ 0.77
VPS13CQ709C8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS13CQ709C8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VPS13CQ709C8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VPS13CQ709C8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.85■□□□□ 0.77
VPS13CQ709C8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.85■□□□□ 0.77
VPS13CQ709C8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VPS13CQ709C8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.84■□□□□ 0.77
VPS13CQ709C8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VPS13CQ709C8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.84■□□□□ 0.77
VPS13CQ709C8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS13CQ709C8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VPS13CQ709C8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
VPS13CQ709C8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VPS13CQ709C8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.84■□□□□ 0.77
VPS13CQ709C8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS13CQ709C8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
VPS13CQ709C8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS13CQ709C8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.83■□□□□ 0.77
VPS13CQ709C8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
VPS13CQ709C8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VPS13CQ709C8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
VPS13CQ709C8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VPS13CQ709C8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.83■□□□□ 0.76
VPS13CQ709C8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS13CQ709C8 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.82■□□□□ 0.76
VPS13CQ709C8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS13CQ709C8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS13CQ709C8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS13CQ709C8 AC105265.2-201ENST00000467189 838 ntBASIC19.82■□□□□ 0.76
VPS13CQ709C8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS13CQ709C8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS13CQ709C8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VPS13CQ709C8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS13CQ709C8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS13CQ709C8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS13CQ709C8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS13CQ709C8 MIR939-201ENST00000401314 82 ntBASIC19.81■□□□□ 0.76
VPS13CQ709C8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VPS13CQ709C8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS13CQ709C8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS13CQ709C8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS13CQ709C8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS13CQ709C8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS13CQ709C8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS13CQ709C8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS13CQ709C8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS13CQ709C8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS13CQ709C8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS13CQ709C8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS13CQ709C8 SNX5-217ENST00000606557 1087 ntBASIC19.78■□□□□ 0.76
VPS13CQ709C8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS13CQ709C8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS13CQ709C8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS13CQ709C8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
VPS13CQ709C8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS13CQ709C8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VPS13CQ709C8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS13CQ709C8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS13CQ709C8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS13CQ709C8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS13CQ709C8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VPS13CQ709C8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.77■□□□□ 0.76
VPS13CQ709C8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS13CQ709C8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VPS13CQ709C8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS13CQ709C8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VPS13CQ709C8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.76■□□□□ 0.75
VPS13CQ709C8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.76■□□□□ 0.75
VPS13CQ709C8 KRT18P10-201ENST00000388836 1287 ntBASIC19.75■□□□□ 0.75
VPS13CQ709C8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VPS13CQ709C8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms